Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1923 ATGTTGACCTCTGCATCTTCCTCCATCTTCTCCTTCACCCCTCACCTAAAGCCCTCACATTCCTCTCGCTTCACCGTCCGGGCTCACGCCAAATCCCCCACTTTCCCCAACCTCAAAGCCCTCGCCGGCGCCGCAGTGTTCGCCGCTGTCGCGCTCCAGTTCCCCTCCGCACGCGCCTCTCCTCCTCCTCCTCCACCTCTCCAAACCGAACAACGCCTTGAAGAATCCCACTCGCCGCTCTCAGACATCCTCGAAACGAACGCCGAGGCCCTCGCCGCTCTCAAGTCCCTCCTCCAGCAGAAGCTCGAGCTCGGCGAGGACGACGAGGCTCTCGCCATCCTCAAGCGCCTAATCGCCGCGCAGCCGGACGCCGTCGACTGGAAGTTCCTTGCAGCGCGCCTCACCTCTGAGACCGGCGACGCCGACGCCGCGCGCGCGTACTACGAGGAAGTTCTGGCGGCGAACCCGCTATCGTTCGAGGCACTGTTCGAGAACGCACTGCTGATGGACCGGTCAGGGGAAGGGGAGGCAGCTATGCGGCGGCTGGAGGAGGCACTGCGCGTGGCCGAGGAGGACAACATGAAGAAGGAGGCGAGGGACGTGAGGCTCATCATGGCGCAGATAATGTTTCTGCAGAAGAATGTGGATGAAGCGTTAGGGATTTATGATCAGCTCACGAAGGAGGATTCGAGGGATTTCAGACCTTACTTTTGCAGAGGCATGATTTATAGCTTGCTCGATAGGAACGACGAGGCGAAGGAGCAGTTTGCAAAATACAGAGAGTTGAGTCCCAAGAAATTTGAGGTGGATGGGTATTTGAGAACCCCTTTGTCAAGGATGAAGCTTTTTAGCACCGATGAGAGCTGA 867 0.5848 MLTSASSSIFSFTPHLKPSHSSRFTVRAHAKSPTFPNLKALAGAAVFAAVALQFPSARASPPPPPPLQTEQRLEESHSPLSDILETNAEALAALKSLLQQKLELGEDDEALAILKRLIAAQPDAVDWKFLAARLTSETGDADAARAYYEEVLAANPLSFEALFENALLMDRSGEGEAAMRRLEEALRVAEEDNMKKEARDVRLIMAQIMFLQKNVDEALGIYDQLTKEDSRDFRPYFCRGMIYSLLDRNDEAKEQFAKYRELSPKKFEVDGYLRTPLSRMKLFSTDES* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1923 288 Coils Coil 208 228 - -
Pvu2g1923 288 PANTHER PROTEIN SLOW GREEN 1, CHLOROPLASTIC 67 287 - -
Pvu2g1923 288 Gene3D Tetratricopeptide repeat domain 28 199 IPR011990 GO:0005515
Pvu2g1923 288 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 67 287 - -
Pvu2g1923 288 Pfam Tetratricopeptide repeat 200 228 IPR019734 GO:0005515
Pvu2g1923 288 Gene3D Tetratricopeptide repeat domain 200 274 IPR011990 GO:0005515
Pvu2g1923 288 SUPERFAMILY TPR-like 89 266 IPR011990 GO:0005515
Pvu2g1923 288 Coils Coil 179 199 - -
Pvu2g1923 288 Pfam Tetratricopeptide repeat 130 156 IPR019734 GO:0005515
Pvu2g1923 288 Pfam Tetratricopeptide repeat 236 265 IPR019734 GO:0005515
Pvu2g1923 288 MobiDBLite consensus disorder prediction 58 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1923 Pvu-Chr2 34239191 34240469 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1923 - - gmx:100780000 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1923 2 34239191 34240469 Pvu2g1923 2 34239191 34240469 ECH