Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1892 ATGAGGGCGTGGAAGAGAGCCGCTGGAGCCATAAAAGACAAGAACAGCATATGGTTTGCAAAGTTCGCGCGAAAGAGTGCGTTCCACAATCCTAAGTTAGAAACTGTGGTGATCAAGGCCACAAGCCATGATGATCAATGCATTGATTCTAAGAACGTGCAGAGAGTGTTCCAATGGTTACGAACCTCGCCCTTGTACCTGAAACCTCTTGTGTGGTCTCTCTCCATGCGCATGCAAAAGACTCGAAGTTGGGTTGTCGCGCTGAAAGGCTTGATGCTCATCCACGGCGTTTTCTGCTGTGACATCCCTGTGGTGCAACGCATAGGGAGGTTACCCTTTGACCTCTCAAACTTTTCTGATGGTCATATGAGCAGTGCAAAGGCTTGGAGCTACAACGATTTCGTTCGTTCTTATTTTGCTTATTTAGATCACAGATCGTCGTTTGTATCCTCCGAGGTTAAAAGGCTAAAGAAGAATAACAATAACAAGGAGATGGAGGTGGAGGACACGTTGATGGAAGAGCTTGAGTGTTTGCAAAAGTTGCAAGGGTTGATTGATATGCTTCTTCAGATCAGGCCTCGGAATCAGCACATGAATGTTGGTTTGGTTCTTGAAGCCATGGATTGTGTTATAGTTGAGGTTTTCGGTGTGTATAGTTTATTTTGCAACAAGATTGCCAAGGTTTTGTTGAGGATATATGAAATGGGTGGGAGGATGGAAGCGAGCATTGGCCTCAAGGTTCTTCAGAAAGCATCGATTCAAAGGGAGGAGTTATCTTTGTTCTTTGAGTTTTGCAAGGAAATTGGTGTCCTCAATGCCTCTCAGTGCCCCAAAATTGATAGAATTTCTCGGGAAGATATTCAAGATCTTAAGAGGATAATCAATGGTGCCTCTTCCAAGAAGGGTGGTGTTGTGGCAAATAATGAGGACAGGGCCATTGTGGTAAGACCCCCTTCTGCCATTGCGCCTGTTTCACACCAGAAGGAGTCGGAGAAAGGTTTGATGACCGTCATCACTGACCAATGGGAGGTTTTTGATGATGATCTAATGGTTGGCGCTAAAGGAATGCATACTGTCTCTGGTGAAAAGAATATTCTCAACACAACCAACCCTTTTGAAGAATCATATATCATGGTGCCTTATGTTCCTGCTCACAATCAACCTCTTCCTGATCTAATTAGTTTTTAG 1188 0.4428 MRAWKRAAGAIKDKNSIWFAKFARKSAFHNPKLETVVIKATSHDDQCIDSKNVQRVFQWLRTSPLYLKPLVWSLSMRMQKTRSWVVALKGLMLIHGVFCCDIPVVQRIGRLPFDLSNFSDGHMSSAKAWSYNDFVRSYFAYLDHRSSFVSSEVKRLKKNNNNKEMEVEDTLMEELECLQKLQGLIDMLLQIRPRNQHMNVGLVLEAMDCVIVEVFGVYSLFCNKIAKVLLRIYEMGGRMEASIGLKVLQKASIQREELSLFFEFCKEIGVLNASQCPKIDRISREDIQDLKRIINGASSKKGGVVANNEDRAIVVRPPSAIAPVSHQKESEKGLMTVITDQWEVFDDDLMVGAKGMHTVSGEKNILNTTNPFEESYIMVPYVPAHNQPLPDLISF* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1892 395 CDD ANTH_N_AP180_plant 33 148 - -
Pvu2g1892 395 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 394 IPR045192 GO:0048268|GO:0072583
Pvu2g1892 395 Pfam ANTH domain 33 293 IPR011417 GO:0005543
Pvu2g1892 395 SUPERFAMILY ENTH/VHS domain 33 149 IPR008942 -
Pvu2g1892 395 Gene3D ANTH domain 153 310 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pvu2g1892 395 Coils Coil 153 173 - -
Pvu2g1892 395 PANTHER OS08G0467300 PROTEIN 1 394 - -
Pvu2g1892 395 SUPERFAMILY GAT-like domain 167 296 - -
Pvu2g1892 395 Gene3D - 4 152 IPR008942 -
Pvu2g1892 395 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1892 Pvu-Chr2 33700259 33701446 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1892 - - gmx:100814886 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1892 2 33700259 33701446 Pvu2g1892 2 33700259 33701446 ECH