Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1883 ATGGGTACGCTTCAGTCTTGGAGGAGAGCCTACGGTGCGATCAAGGACACCACCAAAGTGGGTCTTGCCCATGTCAATAGCGATTACGCGGATTTGGATGTTGCCATAGTCAAAGCTTCGAACCACGTCGAGTGTCCCCCCAAAGAGAGGCACCTCAGAAAGATTCTGTTTGCCACGTCTGCTGTTCGACCAAGGGCCGATGTTGCTTACTGTATTCACGCCCTTTCCCGGCGGTTGGCGAAGACGCGAAATTGGACGGTGGCATTGAAAACACTGATAGTCATCCATAGGTTATTGAGGGAGGGTGATCCTACTTTTAGAGAAGAACTTCTGAATTTCTCACAAAGAGGACGGATTCTCCAACTTTCGAATTTCAAGGATGATTCTAGCCCAATTGCTTGGGATTGCTCTGCCTGGGTACGTACTTATGCACTATTTTTAGAAGAAAGACTTGAATGTTTTCGGATTCTGAAGTATGATATTGAAGCTGAGCGTCTACCCAAACCTGCCCAAGGGCAGGAGAAGGGGTACAGCAAGACCAGGGATTTGGATAGTGATGAGCTATTGGAGCAGTTGCCTGCTTTGCAGCAGCTGTTGCATCGTCTTGTTGGTTGCCGGCCAGAGGGAGCAGCTGTTAGCAATTATGTGATACAATATGCTTTGGCTCTGGTACTGAAAGAGAGCTTCAAGATTTATTGTGCTATTAATGATGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGCCCAGACACGAAGCTATCAAAGCCCTTGAAGCTTACAAACGTGCAGGTCAACAGGCAGCAAGTCTATCTGATTTCTATGATGTTTGCAAAGGGTTGGAACTTGCTAGGAATTTTCAGTTTCCTGCCTTAAGAGAGCCTCCACAATCTTTTCTTACTACCATGGAAGAGTACATTAAGGAGGCACCACGAGTGGTTACAGTTCCAAGTGAACCATTGCTACAATTGACTTACAGACCAGAAGTTCTTGCAATTGAAGATACCAAACCATCTGTTGAAGAACAGGAGCCACCAGTTCCTGTTGATAATAATGTTGTCTCTGATTCTGAACCCGCACCTCATCCACCACCACCACCATCTCATAACAATTTTGAAACTGGAGACCTGCTGGGACTGAATGACAATGCGCCTGATGCATCACTCATAGAGGAAAGAAATGCTCTTGCCCTAGCCATAGTCCCCACTGAAATCGGCACTACATCAGCTTTTAACTCAACTTCTGCTCAAACAAAAGATTTTGATCCAACTGGATGGGAGCTTGCCCTGGTCAGCACTCCAAGTACTGATATTTCGGCAGCAAATGAGAGACAATTGGCTGGTGGATTGGACTCTCTCACTCTTAATAGCTTATACGATGAAGCGGCATACAGATCTTCTCAACAACCACAATACGGAGCACCAGCCCCAAATCCATTTGAAGTGCATGATCCATTTGCTTTATCAAACAGCGTCCCTCCCCCTCCTGCTGTCCAAATGGCAGCAATGCACCATCAAGCAAATCCTTTTGGACCTTACCAACCATTTCAGCCTCAGTCACAGCCACCACAGCAGCAGCATATGTTGATGAACCCAGCAAATCCCTTTGGGGATGCAGGATTTGGAGCATTTCCCCCCAATCCTGTTTCTCACCCACAGAACAATCCATTTGGAAGCACAGGCTTGCTATAA 1692 0.4616 MGTLQSWRRAYGAIKDTTKVGLAHVNSDYADLDVAIVKASNHVECPPKERHLRKILFATSAVRPRADVAYCIHALSRRLAKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPKPAQGQEKGYSKTRDLDSDELLEQLPALQQLLHRLVGCRPEGAAVSNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALEAYKRAGQQAASLSDFYDVCKGLELARNFQFPALREPPQSFLTTMEEYIKEAPRVVTVPSEPLLQLTYRPEVLAIEDTKPSVEEQEPPVPVDNNVVSDSEPAPHPPPPPSHNNFETGDLLGLNDNAPDASLIEERNALALAIVPTEIGTTSAFNSTSAQTKDFDPTGWELALVSTPSTDISAANERQLAGGLDSLTLNSLYDEAAYRSSQQPQYGAPAPNPFEVHDPFALSNSVPPPPAVQMAAMHHQANPFGPYQPFQPQSQPPQQQHMLMNPANPFGDAGFGAFPPNPVSHPQNNPFGSTGLL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1883 563 MobiDBLite consensus disorder prediction 337 380 - -
Pvu2g1883 563 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Pvu2g1883 563 MobiDBLite consensus disorder prediction 542 563 - -
Pvu2g1883 563 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Pvu2g1883 563 SUPERFAMILY GAT-like domain 179 309 - -
Pvu2g1883 563 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 547 IPR045192 GO:0048268|GO:0072583
Pvu2g1883 563 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Pvu2g1883 563 CDD ANTH_N 32 154 - -
Pvu2g1883 563 SMART enth_2 30 161 IPR013809 -
Pvu2g1883 563 Gene3D - 7 161 IPR008942 -
Pvu2g1883 563 Gene3D ANTH domain 173 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pvu2g1883 563 PANTHER OS05G0549000 PROTEIN 1 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1883 Pvu-Chr2 33626787 33634323 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1883 - - gmx:100794160 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1883 2 33626787 33634323 Pvu2g1883 2 33626787 33634323 ECH