Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1866 ATGGCTCCTTTCGCAATTACAACAACATTGGGCACTTCTCACACCTGCCACCTACCAAAGCCTGTAAACTTGGAGTTTCCAATTCGCTGCTCCGCTGCTGCTTCTTCTCCTTCTACGGTTTCCATTCGATCAAAAGCTTCTGATTTTGATTTGAGGACATATTGGGCTTCCCTAATGGTGCAGATCAATCAGAAGCTCGACGAAGCCATTCCAGTTCAGTTTCCTCCTCAGATATATGAAGCTATGAGGTATTCAGTCCTTGCCAAAGGTGTCAAGCGAGCCCCACCTGTTATGTGCATCTCTGCATGTGAACTCTTTGGGGGCAGTCGCCTTGCCGCCTTCCCTACTGCCTGTGCCCTTGAAATGGTTCATGCAGCTTCATTGATACATGATGATCTTCCCTGCATGGATGACTCCCCCTCACGCCGTGGGAAACCTTCAAACCATACCATATATGGTGTTGACATGGCAATTCTTGCTGGTGATGCGCTCTTTCCCCTTGGATTTCGTCACATTGTTTCACAGACTCCCTCTGACCTTGTGCCTGAGCCGAATCTCCTTCGTGTGATTGCCGAGATGGCTCGCTCTGTAGGCTCCACTGGTATGGCTGCAGGGCAGTTCCTGGACCTTGAAGGAGGACCCAATGCAGTTGAATTTATACAAGTAAAAAAGTTTGGTGAAATGGGAGAGTGTTCTGCAGTGTGTGGAGGATTGTTGGCTGGTGCTGACGATGATGAGATAGAGAGACTGAGGAGGTACGGGAGAGCTGTTGGGGTATTGTATGCAGTTGTGGATGATATTCAGGAAGAGAGATTGAAAGCTGAGGGAGGTGGTGACGGGAAAAACAGGGGGAAGAGTTACACAGAGCTTAACGGAGTAGAAAAGGCAACAGAAAAAGCTGAAGAGCTCAGAGAAATGGCTAAGGAAGAATTAGATGGATTTGAGAAGTACGGGGAGCGAGTCTTTCCTCTCTATAGTTTTGTGGATTATGCATTTGATAGAAGCTTCAATGTTCTTGACGATGCCCGGTGA 1032 0.4787 MAPFAITTTLGTSHTCHLPKPVNLEFPIRCSAAASSPSTVSIRSKASDFDLRTYWASLMVQINQKLDEAIPVQFPPQIYEAMRYSVLAKGVKRAPPVMCISACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGKPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDLVPEPNLLRVIAEMARSVGSTGMAAGQFLDLEGGPNAVEFIQVKKFGEMGECSAVCGGLLAGADDDEIERLRRYGRAVGVLYAVVDDIQEERLKAEGGGDGKNRGKSYTELNGVEKATEKAEELREMAKEELDGFEKYGERVFPLYSFVDYAFDRSFNVLDDAR* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1866 343 PANTHER HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC 18 338 - -
Pvu2g1866 343 Pfam Polyprenyl synthetase 77 309 IPR000092 GO:0008299
Pvu2g1866 343 ProSitePatterns Polyprenyl synthases signature 1. 128 144 IPR033749 -
Pvu2g1866 343 Gene3D Farnesyl Diphosphate Synthase 48 343 IPR008949 -
Pvu2g1866 343 Coils Coil 290 313 - -
Pvu2g1866 343 SFLD Isoprenoid Synthase Type I 79 322 - -
Pvu2g1866 343 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 18 338 - -
Pvu2g1866 343 SUPERFAMILY Terpenoid synthases 53 314 IPR008949 -
Pvu2g1866 343 CDD Trans_IPPS_HT 75 334 IPR000092 GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1866 Pvu-Chr2 33389830 33392140 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1866 K13789 - gmx:100788186 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1866 2 33389830 33392140 Pvu2g1866 2 33389830 33392140 ECH