Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1840 ATGACTCTTCCTTGCACTTCTGTGATGACAAGATCAGTGTGGTCTTACAACCTTGAATCGGAGTTCGAGTTGATTCGTTCTGTCATTGCCTTATACCCTTTCATCTCAATGGATACGGAGTTTCCTGGCGTTGTCTTTCAGTCGCATTCAGCATTCCGACAACCACAAAATAACTATGCTGTGATGAAAGCTAACGTGGATAGTATGCACCTCATTCAAGTGGGTCTCACCCTTTCAGACTGCCACGGTAACCTTCCAACCTTTGGAACCTCCAACCGCTTCATTTGGGAATTCAATTTCTGTGAGTTTGATGTGACACAACATCCTCATGCTCCTCACTCAATTGCCCTCCTCCGACGTCAAGGCATGGATTTTGATAAGAATCGAAAGTTTGGAGTGAACATTATGCGATTCGCTGAGCTAATGATGCTTTCAGGACTGCTCTGCAACAATAATATTCAGTGGATTGCTTTCCATAGTACCTATGATTTTGGGTACATGGTGAAGATATTGAGCCAACGCTTTTTTTATATGCAACCATTTCTACCTACAAACTTGTGTGACTTTCTTCAACTGGTTAAATTCTTCTTTGGATATAGAGTATACGACGTTAAACATCTCATTAAATTTTGTCCAAACCTTCACGGCGGTTTAGACAAAGTTTCTGAGTCTCTAGGTTTGGATAATAGCGGCAGAAGAAGTCATCATGCAGGCTCTGATAGCTTAGTCACTCTCCATGTTTTTAATAAAATTAAAACTCTCTATTTTCATACAAAGTTTGACTTGGTAAAACATGTAGGTGTTCTCTATGGTTTAGAGATGTTTTAA 828 0.401 MTLPCTSVMTRSVWSYNLESEFELIRSVIALYPFISMDTEFPGVVFQSHSAFRQPQNNYAVMKANVDSMHLIQVGLTLSDCHGNLPTFGTSNRFIWEFNFCEFDVTQHPHAPHSIALLRRQGMDFDKNRKFGVNIMRFAELMMLSGLLCNNNIQWIAFHSTYDFGYMVKILSQRFFYMQPFLPTNLCDFLQLVKFFFGYRVYDVKHLIKFCPNLHGGLDKVSESLGLDNSGRRSHHAGSDSLVTLHVFNKIKTLYFHTKFDLVKHVGVLYGLEMF* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1840 275 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 5 274 - -
Pvu2g1840 275 Pfam CAF1 family ribonuclease 13 134 IPR006941 -
Pvu2g1840 275 Gene3D - 2 274 IPR036397 GO:0003676
Pvu2g1840 275 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 5 274 IPR039637 GO:0004535|GO:0030014
Pvu2g1840 275 SUPERFAMILY Ribonuclease H-like 11 272 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1840 Pvu-Chr2 33086066 33086893 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1840 K12581 - gmx:100805583 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1840 2 33086066 33086893 Pvu2g1840 2 33086066 33086893 ECH