Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1814 ATGGGTTCTCTGGCTCGACCAAACTCCCTCCTTTTCCAAACCAGTGGAAGGGGACTTACCCAGTTGGTTTTGGTTAACTATGCCAAGTCATCCACACAAGCTGAGGAGGTTTCCAACTTGATTGAGGCATTTGGTGGACAAGCTCTTACCTTCAAGGGAGATGTTTCAAATGAGGCTGATGTGGAGTCTATGATTAAAACTGCAGTTGATGCATGGGGAACTGTTGATGTATTGGTAAATAATGCAGGAATTACACGAGATGGTTTGTTGATGAGAATGAATAAATCTTACTGGTGTTTTTCTCTGCATTCAGGTGAATATGCAGCAGCAAAGATTATGACGATGAAAAAGAAGGGAAGGATAGTGAACATTACATCCGTTATTGGTCAGGTTGGCAATGTTGGAAAAGCCAACTATAGTGCTGCAAAGGCAGGGGTAATTGGCCTCACAAAAAGTGCTGCAAGGGAATATGCTAGCAGAAACATGACTGTTAATGCAGTAGCCCCAGGGTTCATTGCATCTGATATGACTGCCATGCTACGACCAGACATTGAGAAAAAATTATTAGAGTTAATCCCCTTAGGAAGACTTGGTCAATCAGAAGAAGTTGCTGGACTTGTGGAATTCTTGGCTCTAAATCCTTCTGCTAATTACATCACTGGACAGGTGTTCACCATTGATGGAGGTATGGTAATGTAA 699 0.4235 MGSLARPNSLLFQTSGRGLTQLVLVNYAKSSTQAEEVSNLIEAFGGQALTFKGDVSNEADVESMIKTAVDAWGTVDVLVNNAGITRDGLLMRMNKSYWCFSLHSGEYAAAKIMTMKKKGRIVNITSVIGQVGNVGKANYSAAKAGVIGLTKSAAREYASRNMTVNAVAPGFIASDMTAMLRPDIEKKLLELIPLGRLGQSEEVAGLVEFLALNPSANYITGQVFTIDGGMVM* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1814 232 PANTHER SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER 23 232 - -
Pvu2g1814 232 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 126 154 IPR020904 GO:0016491
Pvu2g1814 232 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 23 232 IPR036291 -
Pvu2g1814 232 PRINTS Glucose/ribitol dehydrogenase family signature 73 84 IPR002347 -
Pvu2g1814 232 PRINTS Glucose/ribitol dehydrogenase family signature 113 129 IPR002347 -
Pvu2g1814 232 PRINTS Glucose/ribitol dehydrogenase family signature 139 158 IPR002347 -
Pvu2g1814 232 PRINTS Glucose/ribitol dehydrogenase family signature 160 177 IPR002347 -
Pvu2g1814 232 PRINTS Glucose/ribitol dehydrogenase family signature 193 213 IPR002347 -
Pvu2g1814 232 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 IPR002347 -
Pvu2g1814 232 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 127 IPR002347 -
Pvu2g1814 232 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 158 IPR002347 -
Pvu2g1814 232 PANTHER 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 4 23 232 - -
Pvu2g1814 232 Gene3D - 16 232 - -
Pvu2g1814 232 Pfam Enoyl-(Acyl carrier protein) reductase 23 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1814 Pvu-Chr2 32707663 32710036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1814 23 232 Acyl Lipid Metabolism Gene Families AT1G24360 63.594 5.87e-95 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1814 K00059 - gmx:100811718 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1814 2 32707663 32710036 Pvu2g1814 2 32707663 32710036 ECH
Pvu1g2677 1 51487678 51491391 Pvu2g1814 2 32707663 32710036 PCT