Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1812 ATGGAGTCGGATTCAGACTCCGACGGATCTCACATCTCCGCAACTCCTCCGAGACAATTAAGTTCATCACCGCCTCGGCCGCCACCACCACCTCTCGAGGTTCCAAACAAATCCCGAGTCAGAATCAAACCCTCAAAATCAAAACCAGCCCCTTCTGGATCCTCCAAAGTCCCGTCGAAACCCGACCCCATCCAGGAAACACCTCTCTCCCTTCCCACCGATCTCCCCTTCCAAATTCGGCGACCCTCCGGCGCGGCGTCAGTTTCCTCCTCCATTGAAACCCTTCCTGCTGGTTTCTTCTCCTCCTCATACTCTGCTTCGTTCGCGAAGATTCGAAGACCGCTCGTTAACTTTGAATCTTCTGGAATCGAACCTTTTCTTACTTCCGCCGCGTCTGATTCACGCGCCGAGAGCGCCGATGCGAGGAAACGCGGAAAGGCGCGCCTTCCCAACCTGATAGGTGCCAGCGCGCCTATGCCTGTCGTGAAGCCTCGACCATGCAGCGGCGGCGATGGAAACTTTGTGAAGCTGAACTTGAGTGGCAAGCGAAGGAAGTTCCTGAACAAGAAGGGAAAATTCGGCGGGAAAAGGTACAAGAGAGGGAAATTCAAATCGCAGCAGGAAAAGGAGGGGGAAGAGAAGGATATTGGAGAGTTGAAACAGAGAGGGGGTTGTAAGGTTCGTGAAATTGATTGCGCTGTGGTGGAAGAGGCTGTGGCTGCGGCCCTCGATGAGGCTTCGGAGGAGAATTTGTTGGAAATTTTGAAATTGGTTTATGGCTATGATTGTTTTCGAGACGGGCAGGTTGATGCAATTAAGATGGTTCTTGCTGGGAAGTCAGGAGTGGTTGTTTTGCCGACCGGAGCCGGAAAGTCGCTGTGTTATCAGTTGCCTGCTCTGATCTTGCCTGGGATTACATTGGTTGTTAGTCCATTGGTGGCTTTGATGATTGATCAGTTGAGGCAATTGCCTTATGTGATTAGGGGTGGTCTTCTATCCAGTACTCAGACACCTGAAGAAGCCTCTGAATCAATGATGCAGCTTCGACAAGGGGGGATAAAGGTGCTTTTTGTTTCGCCGGAGCGGTTTCTGAATGAAGAGTTTCTGTCTACTATTTCTTCTTTGTCAGCCATATCACTTGTTGTTATTGATGAAGCACATTGTATATCTGAATGGTCTCACAATTTCCGACCGTCTTTTATGAGACTTCGAGCATCTCTGCTTCGTAAGACACTTAATGTTCGTGCTGTGCTTGCAATGACAGCAACCGCTACTACCACAACTTTAGATGCCATCATGTCTGCTCTAGATATCCCTTCCACAAATCTTATTCAGAAGGCGCAGTTAAGGGACAATTTTCATTTATCAGTGTCTATGGTCAGAAACAGAATGAAAGACCTTCTGATTTTGATGAAGTCTCCTCCTTTTGCTGAGGTTCAGAGCATGATCATATACTGCAAATTTCAGTATGAAACTGATCAAATTAGCAGATATTTGAATGATAACAATATCTTGGCAAAGAGTTATCATAGTGGTATCACTGCAAAAGAACGTAGCTATGTACAGGACTTGTTTAATTCCAACAAGATCAGAGTG 1596 0.4743 MESDSDSDGSHISATPPRQLSSSPPRPPPPPLEVPNKSRVRIKPSKSKPAPSGSSKVPSKPDPIQETPLSLPTDLPFQIRRPSGAASVSSSIETLPAGFFSSSYSASFAKIRRPLVNFESSGIEPFLTSAASDSRAESADARKRGKARLPNLIGASAPMPVVKPRPCSGGDGNFVKLNLSGKRRKFLNKKGKFGGKRYKRGKFKSQQEKEGEEKDIGELKQRGGCKVREIDCAVVEEAVAAALDEASEENLLEILKLVYGYDCFRDGQVDAIKMVLAGKSGVVVLPTGAGKSLCYQLPALILPGITLVVSPLVALMIDQLRQLPYVIRGGLLSSTQTPEEASESMMQLRQGGIKVLFVSPERFLNEEFLSTISSLSAISLVVIDEAHCISEWSHNFRPSFMRLRASLLRKTLNVRAVLAMTATATTTTLDAIMSALDIPSTNLIQKAQLRDNFHLSVSMVRNRMKDLLILMKSPPFAEVQSMIIYCKFQYETDQISRYLNDNNILAKSYHSGITAKERSYVQDLFNSNKIRV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1812 532 SMART ultradead3 260 456 IPR014001 -
Pvu2g1812 532 PANTHER DNA HELICASE RECQ FAMILY MEMBER 52 532 - -
Pvu2g1812 532 Pfam DEAD/DEAH box helicase 266 428 IPR011545 GO:0003676|GO:0005524
Pvu2g1812 532 Gene3D - 447 532 IPR027417 -
Pvu2g1812 532 CDD DEXHc_RecQ4-like 252 445 - -
Pvu2g1812 532 MobiDBLite consensus disorder prediction 20 35 - -
Pvu2g1812 532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 532 IPR027417 -
Pvu2g1812 532 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 253 532 IPR004589 GO:0004386|GO:0006310
Pvu2g1812 532 MobiDBLite consensus disorder prediction 201 218 - -
Pvu2g1812 532 MobiDBLite consensus disorder prediction 1 90 - -
Pvu2g1812 532 Gene3D - 233 442 IPR027417 -
Pvu2g1812 532 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 379 388 IPR002464 -
Pvu2g1812 532 MobiDBLite consensus disorder prediction 192 218 - -
Pvu2g1812 532 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 272 442 IPR014001 -
Pvu2g1812 532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 249 439 IPR027417 -
Pvu2g1812 532 PANTHER ATP-DEPENDENT DNA HELICASE Q4 52 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1812 Pvu-Chr2 32683274 32686315 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1812 K10730 - gmx:100811214 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1812 2 32683274 32686315 Pvu2g1812 2 32683274 32686315 ECH