Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1800 ATGTTGAAGATCAAAATTGTGCTCGGTATCGTCGTGTTTCTGAATTTGAACCATGCCAAATCAGCTGCAGAAGAGCGTCTCGCTGAAGAACACCGTCTTCCTCGTGTTGTCACGCCGCTTCCTGCGCCTAAGATAACCGACCTTCCTCAGTTTCAAGGAGAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGTCCTCAAGTCTATCTAGGAGTTCGTGCCAGGACTCCAAAATCTTTGATTGCTGGATTAATGTGGATTGTTGTGAAGGATAGCAAATATCACTTGCGGCATGTTTGCAAACATGAGGATGGCCTCAGTACTTATGGTTGGACTAAGCACAATGGACGAGATTTTGGACATCAGCTGCTGGTTGACCAGGGCATCATCTTCACTACTGCCTTTTTAAAATCAAAAGAGGAAGGCAGTGGCTATGGAGGGGATTGGACTGTTCGAATTACTGTGCAAGCTCATAAGTCCAAGTGGAATGAGGAATTTGGAAGAGGTGCTCAGCTTTTTTTCTATATGGCAGACGAAGGTGCTAATGCTCTAAATTTAAGTAGAGAAAACATGAACATTCTTGAGGATTCTTCTCTGGTATCTGGCTCTCGAGCGGACATTGGAAACTGGCAGCTACATCTAAAATCAATGGTTATTGGTGGATTTTCTTTCACAACAGATATTATATTTATCTCTGGAACTGATTCAGAAAGTTCAAGAGTGGAAGAGCGTGTCAGTAGTCTTTCAGGAACCTCACTGTCTAATCAACTGAAATATAAAGAACAAGCATTTGATGAAAAGTTTGACAAAATATTCAACTTAGAAGAGAAGGTGGATTCAGAATCCATATCTGTTGGTAAGGCAGCTGTAGGAAACTTATTAGGTGGCATCGGCTACTTTTATGGTCAGTCAAAAATTGCTGCTTCAAGAATCGTCAATCTTCGAGAGCATGTTAATTATATATCATATTGGCCTGCTGAGCTTTACACAGCTGTACCATGTCGACCTTCCTTTCCGAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTATAATCTGGCGTTGGGATATCCATATTTCACTGGATATCATTGGACACTGGTTAGATTTGATGAATGCTGATGGATGGATACCTCGTGAACAAATTCTCGGAGATGAAGCACTGAGTCGGGTCCCTGAGGAATATGTTCCTCAGCATCCTACAGATGCAAATCCTCCAACTCTGTTTTTAGCATTAAGCGATATGATAAATGGCTTGAAGAATAATGAGTTTACTGCAATGGATAAAACTGACATCTCTGTATTCCTGGAGCGTGCCTTTGTTCGATTAGAAGCATGGTTCCAATGGTTCCATACAACTCAATCAGGGAAACAGATGAGCAGCTACTATTGGCATGGACGGGACAATAGCACTATATATGAATTAAATCCCAAGACACATGAACATGACAAACATTATTTCTGGCATTTCCTGACACTGTCCTCTGGATTTGATGATTATCCACGTGCTTCACACCCAACTGCAGACGAACGCCATGTGGATCTTAGATGCTGGATACTACTTGCAGCACACTGTTTGCATTCCATTGAAGAGTTATTGGATAAGGACACTAAACCTGGCATGAATTATGGTTCCACTTCTCAATTGCTATCAGATGTCGAGTTACTGAACCAGATGCATTTTGATGATGCATATGGAGCTTATTTTGATTTTGGGAATCATACAGAAAAGGTTCAACTTAAATGGAAAGATGTGGAGATAGGACACAACCATACTGATCGCCAACTTGTCAGAGATGTTTTAGAGAGGCCTGTTTTGAGATTGGTTCCTCACATTGGTTATGTTAGCCTATTCCCTTTCATGGGGAAGATCATTCCATCTGGATCATGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCACAGCCTCTTTTGGACTGACTATGGACTACGATCGCTTGCCAGGACAAGCTCCTTGTATATGAAATTCAACTCGGATTCTGAGGGCCCATACTGGAGAGGTCAAATTTGGATAAACATAAATTACAGAATTCTTTCAGCGCTCCACCATTACTCCAAAGAGAATGGACCATATCAGGACAGAGCCAAAGCTATCTACAAAGAATTGAGAAGCAATTTAATTAGAAATATAGTACGCAATTATCAAGAGACTGGATTTTTATGGGAACAGTATGATCAGAATAGTGGTGAGGGAAAAGGGTCGCATCCATTTACTGGCTGGACATCTCTTGTTGTATTAATCATGGCGGAAGAATATGGCAGAGTTTAG 2295 0.4118 MLKIKIVLGIVVFLNLNHAKSAAEERLAEEHRLPRVVTPLPAPKITDLPQFQGEHKESLYWGTYRPQVYLGVRARTPKSLIAGLMWIVVKDSKYHLRHVCKHEDGLSTYGWTKHNGRDFGHQLLVDQGIIFTTAFLKSKEEGSGYGGDWTVRITVQAHKSKWNEEFGRGAQLFFYMADEGANALNLSRENMNILEDSSLVSGSRADIGNWQLHLKSMVIGGFSFTTDIIFISGTDSESSRVEERVSSLSGTSLSNQLKYKEQAFDEKFDKIFNLEEKVDSESISVGKAAVGNLLGGIGYFYGQSKIAASRIVNLREHVNYISYWPAELYTAVPCRPSFPRGFLWDEGFHQLIIWRWDIHISLDIIGHWLDLMNADGWIPREQILGDEALSRVPEEYVPQHPTDANPPTLFLALSDMINGLKNNEFTAMDKTDISVFLERAFVRLEAWFQWFHTTQSGKQMSSYYWHGRDNSTIYELNPKTHEHDKHYFWHFLTLSSGFDDYPRASHPTADERHVDLRCWILLAAHCLHSIEELLDKDTKPGMNYGSTSQLLSDVELLNQMHFDDAYGAYFDFGNHTEKVQLKWKDVEIGHNHTDRQLVRDVLERPVLRLVPHIGYVSLFPFMGKIIPSGSWILEKQLELISNHSLFWTDYGLRSLARTSSLYMKFNSDSEGPYWRGQIWININYRILSALHHYSKENGPYQDRAKAIYKELRSNLIRNIVRNYQETGFLWEQYDQNSGEGKGSHPFTGWTSLVVLIMAEEYGRV* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1800 764 Pfam Glycosyl hydrolase family 63 C-terminal domain 249 759 IPR031335 -
Pvu2g1800 764 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 25 216 IPR004888 GO:0004573|GO:0009311
Pvu2g1800 764 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 225 762 IPR004888 GO:0004573|GO:0009311
Pvu2g1800 764 Gene3D - 46 220 IPR038518 -
Pvu2g1800 764 SUPERFAMILY Six-hairpin glycosidases 258 762 IPR008928 GO:0005975
Pvu2g1800 764 Pfam Glycosyl hydrolase family 63 N-terminal domain 58 240 IPR031631 -
Pvu2g1800 764 Gene3D - 275 762 IPR012341 GO:0005975
Pvu2g1800 764 PANTHER ALPHA-GLUCOSIDASE 2 225 762 - -
Pvu2g1800 764 PANTHER ALPHA-GLUCOSIDASE 2 25 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1800 Pvu-Chr2 32505111 32522720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1800 27 761 Glycoside Hydrolase AT1G24320 54.868 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1800 K01228 - gmx:100795161 1308.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1800 2 32505111 32522720 Pvu2g1800 2 32505111 32522720 ECH