Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1710 ATGTCGGGTACTATGTCTCCCAAAACAGGTTCTTTCAAGAAAAAAGCAATCAATGCCTCAAACATGCTGAGGAATTCTTTGACGAGAAAGGGTAGGCGAAGCAGCAAGGTCATGTCCATTGAAATTGAGGATGTCCACGATGCTGAGGAGTTGAAAATAGTTGATGAGTTCCGTCAAGCTCTTATTTTGGACGAACTACTCCCTTCAAAGCACGATGACTATCATATGATGCTTAGATTCCTGAAGGCTAGAAAGTTTGATATTGAGAAGACAAAGGAAATGTGGTCTGAAATGCTCAAATGGAGGAAGGAGTTTGGTGCTGACACTATTCAGGAGGACTTTGAATTCAAAGAAATTGATGAAGTCTTGCAATATTATCCCCAAGGACACCATGGTGTGGACAAAGAGGGAAGGCCCGTGTATATAGAGAGATTAGGCCAAGTCGATGCCGGGAAAATGATGCAAGTCACAACCATGGATCGCTATATCAAATACCATGTGAAGGAGTTTGAGAGGACATTCGATGTAAAGTTTGCAGCTTGTTCGATTGCTGCAAAGAAGCACATCGATCAAAGTACAACTATCCTGGATGTGCAGGGAGTGGGGCTTAAGAGCTTCAACAAACATGCTAGGGAACTCGTTACTCGTCTTCAGAAGATTGACGGTGATAACTATCCTGAGACCTTGAACCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGAATACTGTGGAACACCGTAAAATCATTCCTTGACCCTAAGACCACGGCAAAAATAAATGTTCTTGGCAACAAGTTTGACACCAAATTGCTAGAAATAATTGATGCAAGTGAGTTGCCTGAATTTTTGGGAGGTACTTGTACTTGTGCTGATCAAGGAGGCTGTATGCGTTCTGATAAGGGTCCCTGGAAGGATCCAGAAGTATTGAAGATGGTTCAGACAGGTGCTCACAAATGCTCAAGAAGAGGTGACTCACACGGCGAGGAAGAGAAATCAATTTCTGAAGAACCCGAGACTCCCAAGTCTGAGGCAGCTCCGGCAACTCCCAAGTCCGAGGCAACTCCCAAGTCCGAGGCAACTCCAACCACTCAGGTTACTCCCGTTGCTGAAGAGGTCCCTGCTAAGCCTGTTGAGTTAGCACCAACGGTTGATTTGAATAAGCCTAAGGACGTAGGCCCTGCGGTGGGTTCAACTGCTGCTGTAGCAGCAGCAGCAGCAGCATCAGGGTTGTCTCCTGCAGAGTTTGCGGCTGTGATGAAACGCATGGCTGAGTTGGAGGAGAAAATGGTCATCATGAATAAGAAGCCTGCATCCATGCCACCCGAGAAGGAGCAAATGCTGAATACAACTATAACTCGGGCCGATGACTTGGAGAAGCAACTTTTGGCAACCAAGAAGGCTCTGGAGGATTCACTTGTTCGGCAAGAAGAGCTTTCGGCTTACATTGAGAAAAAGAAAAAGAAGAAGAAGAGATTTTACTTCTTTTAA 1491 0.452 MSGTMSPKTGSFKKKAINASNMLRNSLTRKGRRSSKVMSIEIEDVHDAEELKIVDEFRQALILDELLPSKHDDYHMMLRFLKARKFDIEKTKEMWSEMLKWRKEFGADTIQEDFEFKEIDEVLQYYPQGHHGVDKEGRPVYIERLGQVDAGKMMQVTTMDRYIKYHVKEFERTFDVKFAACSIAAKKHIDQSTTILDVQGVGLKSFNKHARELVTRLQKIDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKINVLGNKFDTKLLEIIDASELPEFLGGTCTCADQGGCMRSDKGPWKDPEVLKMVQTGAHKCSRRGDSHGEEEKSISEEPETPKSEAAPATPKSEATPKSEATPTTQVTPVAEEVPAKPVELAPTVDLNKPKDVGPAVGSTAAVAAAAAASGLSPAEFAAVMKRMAELEEKMVIMNKKPASMPPEKEQMLNTTITRADDLEKQLLATKKALEDSLVRQEELSAYIEKKKKKKKRFYFF* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1710 496 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 401 492 - -
Pvu2g1710 496 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 6 371 - -
Pvu2g1710 496 Pfam CRAL/TRIO domain 124 286 IPR001251 -
Pvu2g1710 496 CDD SEC14 119 287 IPR001251 -
Pvu2g1710 496 PRINTS Cellular retinaldehyde-binding protein signature 76 98 - -
Pvu2g1710 496 PRINTS Cellular retinaldehyde-binding protein signature 245 264 - -
Pvu2g1710 496 PRINTS Cellular retinaldehyde-binding protein signature 278 287 - -
Pvu2g1710 496 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 118 292 IPR001251 -
Pvu2g1710 496 Gene3D - 13 105 - -
Pvu2g1710 496 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 401 492 - -
Pvu2g1710 496 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 6 371 - -
Pvu2g1710 496 MobiDBLite consensus disorder prediction 318 339 - -
Pvu2g1710 496 MobiDBLite consensus disorder prediction 316 367 - -
Pvu2g1710 496 SUPERFAMILY CRAL/TRIO N-terminal domain 46 114 IPR036273 -
Pvu2g1710 496 SUPERFAMILY CRAL/TRIO domain 118 314 IPR036865 -
Pvu2g1710 496 Gene3D - 106 317 IPR036865 -
Pvu2g1710 496 SMART CRAL_TRIO_N_2 73 98 IPR011074 -
Pvu2g1710 496 Coils Coil 416 436 - -
Pvu2g1710 496 Pfam CRAL/TRIO, N-terminal domain 70 96 IPR011074 -
Pvu2g1710 496 SMART sec14_4 118 289 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1710 Pvu-Chr2 30810592 30815613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1710 54 283 Acyl Lipid Metabolism Gene Families AT5G47730 28.452 1.55e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1710 - - gmx:100796901 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1710 2 30810592 30815613 Pvu2g1710 2 30810592 30815613 ECH