Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1708 ATGAGATCTTCTATGGGTACTTTCTCTTCCTCATTTACAAATGTTCGTTCCGCCTCATCATGGTTCGAGTTGTACGCTGCTTTCTCCACGTTCATTATGCTTCTGAGAAGCGCAATCAACGATCTCATACCCCAACAAGTTCGCTCTTTCGTACACTCGAAACTAAAGGCTTTCTTCACAAGCCGTCAAAAAAGCAACGTTGTCTCAATTCAGGTGGCTGAACTTTGGGATGGCCACACCAACCAACTCTTCCAAGCCGTTCAAGAGTATCTCCCGACAAGGATCTCCCAGTCTTACAAATCCCTCAAAGTTGGGAAACTTCCAAAGCACAAGAACATACTAATGGCAGTGGATGGAAAACAGGAGGTGGTGGATGAATTTGAAAACATCACGCTCAAATGGAAGCTGGTTGAGCAAAGCTCCCGAAAAGACTCTGATAATCGAGACCCTCTTCGTCCTCGCAAGTCAACGGGTTTCGAGAGGGAGTCGTTTTATCTAACCTTTGATGAGAAGCATCGAGATGTGGTCATGAACAAGTATCTCTTGCACGTTCTGAACGCATACCAGGAGATGCAAGCAAAGCAGAGAACCATCAAGATCCATTCCATTGGTGGTGGAAGATGTTGGCAGAAAAGTGACTTAACTCATCCAGCATCGTTCAAGTCGCTTGCATTGGATCCAGAGCAAAAGCAGGGAATCATTGATGATTTGGATAGGTTTTTGCGGAGGAAGGAACTGTACAAGAAGGTGGGGAAGCCTTGGAAACGTGGCTACCTCTTGTATGGTCCCCCAGGAACAGGAAAATCTAGCCTTATTGCTGCTATGGCCGATCACTTGAAGTTTGATGTCTATGATCTGGAACTAACCTCTGTGTTTTCTAACTCAGACCTCATGCGAACCCTGAAGGAGACATCTAACCGCTCCATCATCGTCATCGAAGACATCGACTGCAACAGAGAGGTGCATGTTCGATCAAAACCAAAAGCCTTTTCAGATTCCGATTCCGATTCCGACAACGACCACAAGCATGTACAGATTAAGACAAACAGGTTTACTCTGTCGGGTCTGCTTAACTACATGGATGGGTTGTGGTCAAGTGGTGGAGAGGAGCGGATTTTAGTCTTCACAACCAATCACAGAGAAAGAATTGACCCTGCGTTGCTGCGCCCTGGTCGTATGGACATGCACATTCACTTGTCCTTCCTCACAAGCAAGGCCTTTCGAATTCTAGCTTCCAATTACTTAGACGTTGAAGGAGATCATCCACTCTTTCAACAAATTGATGATCTGTTGGAGAAAATACAAGTAACCCCTGCAGTGGTAGCAGAGCAACTAATGAGATATGAGGATCCTGACGTTTGTTTGGAAGAACTTGTTCAATTTCTCCAACAAAAGGCCAAGGAAAGCCTCCCTTTAGACTAG 1422 0.4543 MRSSMGTFSSSFTNVRSASSWFELYAAFSTFIMLLRSAINDLIPQQVRSFVHSKLKAFFTSRQKSNVVSIQVAELWDGHTNQLFQAVQEYLPTRISQSYKSLKVGKLPKHKNILMAVDGKQEVVDEFENITLKWKLVEQSSRKDSDNRDPLRPRKSTGFERESFYLTFDEKHRDVVMNKYLLHVLNAYQEMQAKQRTIKIHSIGGGRCWQKSDLTHPASFKSLALDPEQKQGIIDDLDRFLRRKELYKKVGKPWKRGYLLYGPPGTGKSSLIAAMADHLKFDVYDLELTSVFSNSDLMRTLKETSNRSIIVIEDIDCNREVHVRSKPKAFSDSDSDSDNDHKHVQIKTNRFTLSGLLNYMDGLWSSGGEERILVFTTNHRERIDPALLRPGRMDMHIHLSFLTSKAFRILASNYLDVEGDHPLFQQIDDLLEKIQVTPAVVAEQLMRYEDPDVCLEELVQFLQQKAKESLPLD* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1708 473 SMART AAA_5 254 403 IPR003593 -
Pvu2g1708 473 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 14 469 - -
Pvu2g1708 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 450 IPR027417 -
Pvu2g1708 473 CDD AAA 243 400 - -
Pvu2g1708 473 Pfam Domain associated at C-terminal with AAA 43 137 IPR025753 -
Pvu2g1708 473 Pfam ATPase family associated with various cellular activities (AAA) 259 399 IPR003959 GO:0005524|GO:0016887
Pvu2g1708 473 PANTHER BCS1 AAA-TYPE ATPASE 14 469 - -
Pvu2g1708 473 ProSitePatterns AAA-protein family signature. 371 389 IPR003960 GO:0005524|GO:0016887
Pvu2g1708 473 Gene3D - 210 397 IPR027417 -
Pvu2g1708 473 Gene3D - 398 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1708 Pvu-Chr2 30772327 30774221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1708 247 445 Miscellaneous Gene Families AT3G02450 32.057 4.46e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1708 - K08900 gmx:100787726 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1708 2 30772327 30774221 Pvu2g1708 2 30772327 30774221 ECH