Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1701 ATGAAACTGAAACATGAAGAATCATCGTCATTCATCAAATTCCACATGTCAAGGCATCAATGCCCCACCACCATTTTTGGCCTCTCTTTCTCTTTCATTTTCTCCCTATGGTGCCTCCTCTTCTTCTACATCAAGCTTCGCCTCGTTCATGGCACCGGAGCTGTGTTGGAGTTCAATGAATCAGGTAGCACCAATAATATTAGTCAGAAACTTGCAAAACCCTTGTACTCACTTCCTGAAACCACTAGTATAGAACAAGTGTTTTGGCATGTCTTGGGAAATGGTAGTAATTTGGTGTGCAAGTTGCATCCTCCGCAGGAGGAAAATAAACTGCTGCAAATTCCTGATGGGAAACTGCAGCCCAATTACGATGAACTCAGAAACATGACAGAAGCAGAAGAAAAAACAAAGGGCATGAACTCAGCGCTTGTTAACATAACTCACAGGCTAGAATCTGATGGCTCTGTGTACAACTATGCCTCCGAGTCCAAAGGTGCAAAGGTGGTGGCTCATAATAAGGAGGCGAAAGGTGCAACGAATATACTCGGGAAGGATCATGATAAGTATCTGAGAAACCCTTGTTCTGTTGAAGGGAAATTTGTTGTTATTGAGCTTTCAGAGGAGACTCTGGTTGATTCTGTGAAGATTGCAAACTTTGAGCATTATTCTTCCAACTTCAAGGAGTTTGATTTGGCTGGAAGTTTGAGCTATCCAACTGAAGAATGGAGCGTTCTGGGAAGATTTATTGCTTCCAATGTGAAACATGCACAGGTCTTTAAACTGTCTGAGCCCAAGTGTGTAAGGTATTTAAAGTTGACCTTGCTTAGTCATTATGGATCTGAGTTTTACTGCACACTGAGTGTTGTAGAAGTTTATGGGATCAATGCAATAGAGCGGATGCTTAAGGATCTAATTGTGGCTTCTGTGGGCTACATTCCTGATAAGCCACCTGAGGATAATATCAGTGAGACCCCATCTTTGAAATCAGAAGATGGTCAAAATGATAAAAATGGAAAAAAAGTTGATACTAAGAATGATACTGTGGCTGCTCAGATATCAAGCAATGATACCACTCGAGAGTATGATGCAGAAGCGGTAAAAACAACAGTGACTGCCAACTTGATTCCAGATTCTGTCTTAGAACTTAGACAACAGCTGAATGGTAGGGTAGCTGGTGACACTGTTCTGAAGATTTTGATGAAGAAAGTGAGGTCAGTAGAGGTAAACTTATCAGCCCTTGAGGAAATCCTCAAAGAAATGAACAGAAAACAAGGAGCTAAAATACCGGATCTTGAGAAAGAGTTGTCCAGACTATCAGAAAGTCTTGGAGAAAGCAAGTCAGAGATCAAAGATCTATGGCACTGGAACACAAATTTGGAAAAAGGAATATCTGAGGTTGATTCTTGGAAAGATGCTGTCTCATCTCAGCTCAACGAATTAGCCAGAGAAAACAGCATGCTAAGATCAGATGTTCAAAAGATTGCAAGTAATCAAGCAAATATGGAAACCAAAGAACTTGCTGTCTTAGCAACGAGTCTTATTTTTGTGTGCCTTGCACTTCTCAAGATAGTTTCGGTATACATGTTGACGTTTTTTGCATCATATAACACAAATAAGGTGCCCCAGACAATTAGAGGATGGGTTACATTATTTGTATGCTGTAGTGTAACAATATTCATTATCTTGTTTAATAGCTAG 1698 0.4034 MKLKHEESSSFIKFHMSRHQCPTTIFGLSFSFIFSLWCLLFFYIKLRLVHGTGAVLEFNESGSTNNISQKLAKPLYSLPETTSIEQVFWHVLGNGSNLVCKLHPPQEENKLLQIPDGKLQPNYDELRNMTEAEEKTKGMNSALVNITHRLESDGSVYNYASESKGAKVVAHNKEAKGATNILGKDHDKYLRNPCSVEGKFVVIELSEETLVDSVKIANFEHYSSNFKEFDLAGSLSYPTEEWSVLGRFIASNVKHAQVFKLSEPKCVRYLKLTLLSHYGSEFYCTLSVVEVYGINAIERMLKDLIVASVGYIPDKPPEDNISETPSLKSEDGQNDKNGKKVDTKNDTVAAQISSNDTTREYDAEAVKTTVTANLIPDSVLELRQQLNGRVAGDTVLKILMKKVRSVEVNLSALEEILKEMNRKQGAKIPDLEKELSRLSESLGESKSEIKDLWHWNTNLEKGISEVDSWKDAVSSQLNELARENSMLRSDVQKIASNQANMETKELAVLATSLIFVCLALLKIVSVYMLTFFASYNTNKVPQTIRGWVTLFVCCSVTIFIILFNS* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1701 565 SUPERFAMILY Galactose-binding domain-like 195 292 IPR008979 -
Pvu2g1701 565 MobiDBLite consensus disorder prediction 316 350 - -
Pvu2g1701 565 Coils Coil 396 423 - -
Pvu2g1701 565 Coils Coil 428 448 - -
Pvu2g1701 565 Pfam Sad1 / UNC-like C-terminal 171 293 IPR012919 -
Pvu2g1701 565 MobiDBLite consensus disorder prediction 329 343 - -
Pvu2g1701 565 ProSiteProfiles SUN domain profile. 136 296 IPR012919 -
Pvu2g1701 565 PANTHER MEMBRANE PROTEIN CH1 RELATED 53 563 IPR045120 GO:0016020
Pvu2g1701 565 Coils Coil 477 497 - -
Pvu2g1701 565 Gene3D - 171 304 - -
Pvu2g1701 565 PANTHER SUN DOMAIN-CONTAINING PROTEIN 5 53 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1701 Pvu-Chr2 30670141 30672926 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1701 - - gmx:102668828 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1701 2 30670141 30672926 Pvu2g1701 2 30670141 30672926 ECH