Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1690 ATGTTCAAATTGTTTACTCTTCCGAGACTGTCATGGAGCTCCGGTAATGGTGGTCAGGAAAAGGTGGAGCTAACAGCTGTTGAAGTAGAGTCACTTCGATCAGAACTTGCTGATATAGAAGAGCGGGAAGCTCAATTGAAAGCTCGGTTGGAAAATATTGATGAAACCTTGCGGTCAGCTCGTCTATCAGGCTATTTGTACATTCGAAAAAGATGGGCAGCACTACCAGGAGAACCACCACCTATAGATGACACTGACATAGATGATTGGCTTCCTCGCTTTGTTGTTCTTCATGGTGCATGTCTATACTTATATTTGTTGTGTACAGATCTAAGTCCTCACGACTCAACACTTCTATCAGATATTGTTGAAATAGAGCAACTCCCAAGTTTTAAGCGTGAAGATGATGAGACGCGAGACGCCTTTTATATTTTAACTCGTCATGGTTTAAGATATGAATGCTCAAGCAGTTCTAAAATACAGGTGGATTCGTGGTTATCAGTTTTACAATTTGAATGCAAATTGGAATCTGATGCATCAAAGCCCAGTAGTTCAATAGAGTTGTAA 567 0.4056 MFKLFTLPRLSWSSGNGGQEKVELTAVEVESLRSELADIEEREAQLKARLENIDETLRSARLSGYLYIRKRWAALPGEPPPIDDTDIDDWLPRFVVLHGACLYLYLLCTDLSPHDSTLLSDIVEIEQLPSFKREDDETRDAFYILTRHGLRYECSSSSKIQVDSWLSVLQFECKLESDASKPSSSIEL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1690 188 PANTHER OS05G0595500 PROTEIN 1 185 - -
Pvu2g1690 188 ProSiteProfiles PH domain profile. 59 174 IPR001849 -
Pvu2g1690 188 SUPERFAMILY PH domain-like 53 172 - -
Pvu2g1690 188 PANTHER OS05G0595500 PROTEIN 1 185 - -
Pvu2g1690 188 SMART PH_update 60 176 IPR001849 -
Pvu2g1690 188 CDD PH 62 169 - -
Pvu2g1690 188 Coils Coil 22 56 - -
Pvu2g1690 188 Gene3D - 54 185 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1690 Pvu-Chr2 30590547 30593924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1690 - - gmx:100803809 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1690 2 30590547 30593924 Pvu2g3067 2 46091423 46094799 PCT