Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1681 ATGGCGAAGGAACTGTTGACTCTTGATAATGCCACAACCTGCACATCTTGGAACCTTTCCGGTACCAGGCTTGCTGCTGCTTCCGCTGATGGCACTCTTTCAATCTTCGATTCCCGCGATCCATCTTCTTCTTCCTCCCTCCGCTCTACTTTCAAATCTAGGGTTCTCGAAGGAAACATCGTGAAGATTGTTTGGATTCCGCCAGAGTACGGTGATGCAGTTGCGTGTATTTCTGCCGATGGAATTGTGTCACTGTGGGAGGAGGTTGCAGAAGATTCCCAGTCTCTTCAGTGGAAAATGTGCAAAAGCTTTGGAAACAGTTCAAGCAAAGTCCTTGATGTTCAATTTGGAATCTCTTTGACTAGTTTGAAAATGGTTGCAGCATATTCAGATGGCAATGTAAGAGTTTTTGAGCTCCTGAACCCCTTAGAACTGAGAAACTGGCAGCTTCAGGCTGAATTTCAAAATGCTATTGAGTCAGTTTCTGCATTTGGAAAGGCTTCGTGCCTCTCTGCTTCCATATCTTGGAATCTGCAAAAGGGTGAAAGCCAGGAATCAAGCTTCCTTATAGGTTTTAATTCAAATACATCAGAGCTTAATTCTTCCAAGGTATGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCGGTAGCAGAATTGGCAATGCCTGAAGACAAGGGTGATCAGGTTTATGCTGTTGCATGGGCACCAAATATTGGCAGACCGTATGAGATCATAGCGGTTGCAACTCACAAGGGACTTGCAATATGGCATCTTGGATTGAATCCTGATCATAATGGAAGACTCCCAGTAGAGAGAGTTGCACTACTCTCAGGTCACGAGGGCATGGTGTGGCAAATGGAGTGGGATATGGGTGGAATGACTTTGGCTACTACAGGTCAAGATGGAATGGTCCGATTATGGCAGTCTAATCTCAATGGCGTTTGGCATCAGCAAGCTGCATTTGAACCCACTTCGTAG 981 0.4536 MAKELLTLDNATTCTSWNLSGTRLAAASADGTLSIFDSRDPSSSSSLRSTFKSRVLEGNIVKIVWIPPEYGDAVACISADGIVSLWEEVAEDSQSLQWKMCKSFGNSSSKVLDVQFGISLTSLKMVAAYSDGNVRVFELLNPLELRNWQLQAEFQNAIESVSAFGKASCLSASISWNLQKGESQESSFLIGFNSNTSELNSSKVWEFDQAHQRWLPVAELAMPEDKGDQVYAVAWAPNIGRPYEIIAVATHKGLAIWHLGLNPDHNGRLPVERVALLSGHEGMVWQMEWDMGGMTLATTGQDGMVRLWQSNLNGVWHQQAAFEPTS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1681 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 277 309 IPR001680 GO:0005515
Pvu2g1681 326 PANTHER NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER 6 325 IPR037363 GO:0005198
Pvu2g1681 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 277 309 - -
Pvu2g1681 326 Pfam WD domain, G-beta repeat 277 308 IPR001680 GO:0005515
Pvu2g1681 326 Gene3D - 9 323 IPR015943 GO:0005515
Pvu2g1681 326 SMART WD40_4 1 37 IPR001680 GO:0005515
Pvu2g1681 326 SMART WD40_4 44 87 IPR001680 GO:0005515
Pvu2g1681 326 SMART WD40_4 213 258 IPR001680 GO:0005515
Pvu2g1681 326 SMART WD40_4 97 138 IPR001680 GO:0005515
Pvu2g1681 326 SMART WD40_4 270 309 IPR001680 GO:0005515
Pvu2g1681 326 PANTHER NUCLEOPORIN SEH1 6 325 IPR037597 GO:1904263
Pvu2g1681 326 SUPERFAMILY WD40 repeat-like 9 310 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1681 K14299 - gmx:100780788 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1681 2 30509786 30512686 Pvu2g1681 2 30509786 30512686 ECH