Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1679 ATGGCCTCCGAAGCAAAGCCTGCCGGTGAGGCTGCCAAACCTCGTACTCACGAGTTTCTCAGCATCTGCAAGTCTCTCGTCGCCGGTGGAGTTGCCGGAGGAGTGTCACGAAGTGCTGTGGCTCCACTGGAGAGGTTGAAGATTCTGCTGCAGGTTCAAAATAGTCAAAATATAAAATACAACGGAACAAGTCAAGGCTTAAAATATATATGGAAAACTGAGGGTTTTAGAGGATTGTTTAAAGGAAACGGAACTAACTGTGCACGTATTGTCCCCAATTCAGCAGTGAAGTTCTTCAGCTATGAGCAAGCTTTGAAGGGTATTTTATGGTTCTACCAGCAGCAACCGGGAAATGAAGAAGCTCAGCTCACTCCCATTTTGCGTCTTGGAGCTGGAGCTTGTGCGGGAATCATTGCCATGTCTGCCACTTATCCAATGGACATGGTGCGAGGAAGGCTAACCGTCCAGACAGAAGCATCTCCACGTCAATACAGGGGAATTTACCATGCTCTTTCAACAGTCTTCAGGGAAGAAGGTCCTCGAGCTTTGTATAAAGGCTGGCTACCTTCAGTTATAGGAGTTATACCATATGTGGGTCTTAATTTTGCCCTATATGAGTCTCTCAAAGACTGGTTGATTCGATCTAAACCATTTGGAATGGGTCAAGACTCTGAGCTAAGTGTAACAACAAGGCTTGCATGTGGGGCTGCTGCTGGTACTGTTGGCCAAACTGTGGCTTACCCTCTTGATGTGATTCGCCGAAGAATGCAAATGGTGGGATGGAAAGATGCTGCACCAGTTGTCGCTGGTGAGGGGAAGAGCATAATGGAGTATAGTGGCATGGTTGATGCATTCAGGAAAACTGTGCATCACGAGGGATTTGGAGCATTATACAAGGGCTTAGTTCCCAATTCGGTGAAGGTGGTCCCTTCCATAGCTATTGCTTTTGTGTCATACGAGATGGTCAAGGACATTCTTGGAGTAGAAGTGAGAATCTCACATTGA 1005 0.4667 MASEAKPAGEAAKPRTHEFLSICKSLVAGGVAGGVSRSAVAPLERLKILLQVQNSQNIKYNGTSQGLKYIWKTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQALKGILWFYQQQPGNEEAQLTPILRLGAGACAGIIAMSATYPMDMVRGRLTVQTEASPRQYRGIYHALSTVFREEGPRALYKGWLPSVIGVIPYVGLNFALYESLKDWLIRSKPFGMGQDSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAAPVVAGEGKSIMEYSGMVDAFRKTVHHEGFGALYKGLVPNSVKVVPSIAIAFVSYEMVKDILGVEVRISH* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1679 334 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 10 330 - -
Pvu2g1679 334 PANTHER SOLUTE CARRIER FAMILY 25 10 330 - -
Pvu2g1679 334 Gene3D Mitochondrial carrier domain 16 328 IPR023395 -
Pvu2g1679 334 SUPERFAMILY Mitochondrial carrier 18 321 IPR023395 -
Pvu2g1679 334 PRINTS Mitochondrial carrier protein signature 25 38 IPR002067 GO:0055085
Pvu2g1679 334 PRINTS Mitochondrial carrier protein signature 38 52 IPR002067 GO:0055085
Pvu2g1679 334 PRINTS Mitochondrial carrier protein signature 82 102 IPR002067 GO:0055085
Pvu2g1679 334 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Pvu2g1679 334 PRINTS Mitochondrial carrier protein signature 184 202 IPR002067 GO:0055085
Pvu2g1679 334 PRINTS Mitochondrial carrier protein signature 235 257 IPR002067 GO:0055085
Pvu2g1679 334 Coils Coil 329 334 - -
Pvu2g1679 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 20 107 IPR018108 -
Pvu2g1679 334 Pfam Mitochondrial carrier protein 124 214 IPR018108 -
Pvu2g1679 334 Pfam Mitochondrial carrier protein 225 326 IPR018108 -
Pvu2g1679 334 Pfam Mitochondrial carrier protein 21 106 IPR018108 -
Pvu2g1679 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 325 IPR018108 -
Pvu2g1679 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 211 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1679 Pvu-Chr2 30488960 30492759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1679 26 329 EF-hand Containing Proteins AT5G51050 39.145 1.37e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1679 K14684 - gmx:100784834 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1679 2 30488960 30492759 Pvu2g1679 2 30488960 30492759 ECH