Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1677 ATGTCTTCATCGAAGGAGGCGGACCCAACCCTGGGTTACCTCACTCGGAAGGACACGGAGGTGAAGCTTCCGCGTCCAACCAGGGTCAAGAATAAAACCCCTGCTCCTATCCAAATCACCGCCGAGCAAATTCTCCGGGAGGCTCGGGAGCGTCAAGAGGCGGAGATCCGCCCTCCTAAGCAGAAAATCACCGACTCCACCGAGCTCGGCGAATACCGGCTTCGCAAGCGCAAGGAGTTCGAGGACCTTATCCGCCGCGTTCGATGGAACATTGGCGTGTGGATCAAGTACGCGCAATGGGAGGAATCGCAGAAGGATTTCAAACGCGCGCGTTCCGTTTGGGAGAGGGCGCTGGAGGTGGATTACAAGAACCACACGCTCTGGCTCAAGTACGCGGAGGTCGAGATGAAGAACAAGTTCATAAACCACGCCCGCAACGTGTGGGATCGCGCCGTCACGCTTCTTCCGAGGGTGGATCAGTTGTGGTACAAGTACATTCACATGGAGGAGATGTTAGGCAATGTCGCCGGCGCGAGGCAGGTTTTCGAGAGGTGGATGAAGTGGACTCCGGACCAGCAGGGATGGCTGTCGTACTTAAAATTTGAGCTTAGGTACAATGAAATTGAACGCGCCAGAGGGATTTTTGAGCGATTTGTCGAGTGCCACCCTCGGGTTGGTGCTTGGATACGCTATGCTAAGTTTGAGATGAAGAGTGGCGAGGTTGGGAAGGCTAGGACCGTGTACGAGAGAGCTGTGGATAAGCTATCTGATGACGAGGAAGCAGAGCAGTTATTTGTTGCTTTTGCTGAGTTTGAGGAAAGGTGTAAGGAGACTGAGCGTGCAAGAGCTATCTATAAGTTTGCTCTTGATCATATTCCCAAGGGAAGGGCGGAAGATTTGTATAGAAAATTTGTGGCATTTGAGAAGCAGTATGGGGACAGAGAAGGAATCGAAGATGCCATCGTTGGGAAGAGAAGGTTTCAGTATGAGGACGAAGTGAAGAAGAGTCCGTTGAATTATGATTCCTGGTTTGACTACATAAGGTTGGAGGAAAGTGTGGGGGATAAGGAAAGGATCAGGGAGGTTTATGAGAGAGCTATAGCCAATGTTCCCCCGGCGGAGGAGAAGCGCTACTGGCAGCGCTATATTTATTTGTGGATTAATTATGCACTCTATGAAGAGCTCGATGCTGGGGATGCGGAGCGAACAAGGGACGTATACAGGGAGTGCCTCAACCAGATACCTCACCAGAAGTTCTCGTTTGCAAAATTATGGCTTCTAGCAGCACAGTTTGAAATACGTCAGCTGAATCTCAAGGCTGCTCGTCAAATATTAGGAAATGCCATTGGAAAGGCTCCTAAAGATAAGATTTTTAAGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGACCGGTGCAGAAAACTATATGAAAAATATCTGGAGTGGTCTCCAGAAAATTGTTATGCTTGGAGCAAGTATGCTGAGTTGGAGAGATCATTATCTGAGACGGATCGAGCTCGAGGAATTTTTGAGCTTGCAATTGCCCAACCAGCATTGGACATGCCTGAACTCTTGTGGAAGGCATTCATTGACTTTGAGACTGCTGAGGGTGAATTTGATAGAGCAAGAGCACTTTATGAAAGGCTTCTTGACCGAACAAAGCACTTGAAGGTATGGATAAGCTATGCGGAATTTGAGGCAACAGCTATGGACGTGGACAATGTAGACGTAACAGAAAACGAACAAAAGAAGCAATGCATTGAGCGTGCTAGAAGGGTGTTTGAGAAGGCTCTCAACTACTTCAGATCATCAGCTCCAGATTTGAAAGAAGAAAGGGCAATGTTATTGGAAAAATGGCTTAACATGGAGACTACATTTGGAGATCTGGGTGATGTTAGCTTAGTCCAGTCTAAGCTGCCCAAAAAGCTCAAGAAGAGAAGACATGTTACCACTGAAGATGGTTCTACCAGAATTGAAGATTTCATCGACTTTTTGTTTCCTGAAGAAAGTCAGACAACAAATCTCAAGATCTTGGAAGCTGCTTACAAATGGAAGAAGCAAAAACTGTCTTTGGATGATTAA 2088 0.4722 MSSSKEADPTLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWNIGVWIKYAQWEESQKDFKRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQVFERWMKWTPDQQGWLSYLKFELRYNEIERARGIFERFVECHPRVGAWIRYAKFEMKSGEVGKARTVYERAVDKLSDDEEAEQLFVAFAEFEERCKETERARAIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVKKSPLNYDSWFDYIRLEESVGDKERIREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDAERTRDVYRECLNQIPHQKFSFAKLWLLAAQFEIRQLNLKAARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLSETDRARGIFELAIAQPALDMPELLWKAFIDFETAEGEFDRARALYERLLDRTKHLKVWISYAEFEATAMDVDNVDVTENEQKKQCIERARRVFEKALNYFRSSAPDLKEERAMLLEKWLNMETTFGDLGDVSLVQSKLPKKLKKRRHVTTEDGSTRIEDFIDFLFPEESQTTNLKILEAAYKWKKQKLSLDD* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1677 695 Gene3D Tetratricopeptide repeat domain 482 667 IPR011990 GO:0005515
Pvu2g1677 695 Gene3D Tetratricopeptide repeat domain 331 481 IPR011990 GO:0005515
Pvu2g1677 695 PANTHER PRE-MRNA SPLICING FACTOR 22 693 IPR045075 GO:0000398
Pvu2g1677 695 Pfam Tetratricopeptide repeat 466 488 IPR019734 GO:0005515
Pvu2g1677 695 MobiDBLite consensus disorder prediction 11 27 - -
Pvu2g1677 695 SUPERFAMILY TPR-like 195 258 IPR011990 GO:0005515
Pvu2g1677 695 Gene3D Tetratricopeptide repeat domain 122 330 IPR011990 GO:0005515
Pvu2g1677 695 Coils Coil 534 554 - -
Pvu2g1677 695 SUPERFAMILY TPR-like 268 551 IPR011990 GO:0005515
Pvu2g1677 695 PANTHER - 22 693 - -
Pvu2g1677 695 SUPERFAMILY TPR-like 81 206 IPR011990 GO:0005515
Pvu2g1677 695 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
Pvu2g1677 695 SUPERFAMILY TPR-like 526 630 IPR011990 GO:0005515
Pvu2g1677 695 SMART hat_new_1 173 204 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 436 467 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 354 388 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 206 237 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 320 352 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 398 434 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 469 501 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 71 103 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 239 274 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 539 570 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 503 537 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 105 137 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 587 620 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 139 171 IPR003107 GO:0006396
Pvu2g1677 695 SMART hat_new_1 276 310 IPR003107 GO:0006396
Pvu2g1677 695 MobiDBLite consensus disorder prediction 1 34 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1677 K12869 - gmx:100811745 1345.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1677 2 30474876 30481627 Pvu2g1677 2 30474876 30481627 ECH