Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1654 ATGAACGCTGCTCCCAAGCACGAACGCCGCTGGGCGTCTGACACGGTGCCGGAGATTGCATTCGTCAGCGGCGCCACTTCGCCGGGAACTGAGTCCTGCTCCGTAGCCGACGAGTACGTCGAGGTCACTCTCGACGTTCAAGACGATCACACAGTCGTTCTCCGCGGCGTTGAGCCGGTGACTGTCGTTAACGTCGACGACGGCTATGCTCCGAGCGGAAACGAAACTCCGGTGTCATCCGCGTGGTCGCCGTCGATCAGGAGGAGCTCTCCCAACCCGTGGCGACAGTTCTCGCAGGAACTTAAGGCTGAGGCGGTTGCGAAGGCGAGGCAGTTCTCGCAGGAGCTCAAGGCGGAGCTGCGGCGGTTCCCGTGGAGCCAGGGCGGATCTGAAACGGCGTTGGTGCGGCGAGATATCAGGAAGCAACGCGCTCAGCTTGAGCGCAACCGCTCCGGTACGATGAAAGCACTCCGTGGACTGAAATTCATTAGCAGTAAATCAAACGGCGTTGATGCCTGGAACCAGGTGCAAAGCAGTTTCGATAGTCTTGCTAAGGACGGTTTTCTCTACCGCACCGATTTTGCGCAATGCATAGGGATGAAGGACTCTAAGGAGTTCGCTCTGGAACTGTTCGATGCTCTGGGTCGTAGACGAAGACTCAGTGTTGAAAAGATCAGCAGAGACGAGCTTAGCGAATTCTGGTCGCAAATTACCGATCAAAGCTTTGATTCACGGCTCCAGATCTTCTTTGATATGGTGGACAAGAACGAAGATGGGAGAATCACCGAAGAAGAAGTGAAAGAGATCATTATGCTAAGCGCTTCAGCAAATAAGTTATCCAGATTGAAAGAGCAAGCCGAAGAATACGCAGCCCTGATCATGGAAGAGTTAGACCCTGAAAGACTTGGCTACATTGAGCTATGGCAATTGGAGACGCTTCTGTTACAAAAGGATACGTATCTGAACTACAGTCAAGCACTAAGCTACACGAGTCAAGCTTTGAGCCAGAACCTACAAATAAGGGGAAGAAGCCCGATACGCAGGATGAGCCGCAGGGTGATGTACTATTTGCAAGAAAATTGGAGGAGGCTTTGGATTCTAGCAGTGTGGGTTTCCGTGATGATTGGGCTGTTTACGTGGAAATTCATGGACTACAAGCGAAAAAATGCTTATCATGTCATGGGTTACTGTCTTCTCGCGGCCAAAGGTGCTGCTGAGACACTCAAGTTCAACATGGCACTCATACTCTTTCCCGTCTGCAGAAATACCATAACTTGGCTCAGGTCCACCAACTTAGCTTATATCGCACCTTTCGATGATAACATCAACTTTCATAAGACAATTGCTGCAGCAGTACTGATTGGTGTGATACTTCATGCCGGGAATCACCTTGCATGTGATTTTCCAAGACTTGTTAATTCGTCTGAAGAAATTTATGAGAAGTATTTGAATGGCGTATTTGGTGATCACAAACCCGGTTACGGAGACCTCATTAAGGGGGTTGAGGGCGTGACTGGAATTCTGATGGTGATTTTGATGGCAATAGCATTCACTCTTGCAACGAAGTGGTTCAGAAGAAATCTTATTAAGCTTCCTAAACCGTTTAATAGGCTCACTGGTTTCAATGCGTTCTGGTATTCGCACCATCTATTTGTCATTGTCTATGTCCTGCTCATCGTTCATGGTGTAAATCTTTATCTCGAGCGCAAATGGCACCTTCAAACGACATGGATGTATCTTGCAGTTCCAATCGTCCTTTATTTGGGAGAAAGAACGTTGAGATTCTTCCGTTCTGGTTTCTATACAGTTCGTCTTATAAAGGTTGCCATTTATACTGGAAATGTTCTGACATTGCAAATGTCGAAGCCACCTCAATTTCGTTACAAGAGTGGACAATACATGTTTGTACAATGTCCTGCTGTTTCTCCATTTGAGTGGCATCCGTTTTCTATCACCTCTGCCCCTGGCGATGACTACCTGAGTGTTCACATAAGGCAACTGGGAGATTGGACGCAGGAGCTCAGAAAGGTATTCTCTGCAGCCTGTGAGCCTCCCGTAGCTGGGAAGAGCGGCCTTCTCAGGGCCGATGAAACCACCAAGAAATGCTTACCAAAGCTAAGGATAGATGGACCTTACGGTGCGCCAGCACAAGACTACAGAAACTATGATGTCCTACTACTTGTCGGTCTCGGGATTGGAGCAACACCTTTTATTAGCATTCTAAAAGATCTTCTCAACAATATTGTCAAAATGGAGGAGCTGGCGGATTTAGTCTCCGATTCAAGTAGAGGTTCAGACCTTAGCACTGGGAGTTCAGATTCCCCGTCTTTTAGTAAGATTTCTCCGAAACGGAAGAAGACACTCAAGACTACCAATTCTTATTTCTACTGGGTGACAAGGGAACAAGGTTCTTTCGATTGGTTTAAAGGGGTCATGAATGAAGTTGCTGAACTTGATCAAAGGGGTGTTATTGAGATGCACAACTACTTAACTAGCGTATACGAGGAAGGCGATGCCAGATCCGCCCTCATTACTATGGTGCAAGCCCTCAACCACGCAAAAAATGGAGTTGATGTTGTTTCTGGGACAAGGGTGAGAACTCATTTTGCTAGGCCTAACTGGAAGAAGGTTTTCTCTAGAATATGTTCTAAGCACAGCAATGGACGAATAGGAGTATTCTATTGTGGCGCACCGGTTTTGGCCAAAGAATTGAGCAAGCTCTGCTTTGAGTTCAACGAAAAAGGTCAAACAAAATTTGAGTTCCATAAGGAGCATTTCTAA 2781 0.4729 MNAAPKHERRWASDTVPEIAFVSGATSPGTESCSVADEYVEVTLDVQDDHTVVLRGVEPVTVVNVDDGYAPSGNETPVSSAWSPSIRRSSPNPWRQFSQELKAEAVAKARQFSQELKAELRRFPWSQGGSETALVRRDIRKQRAQLERNRSGTMKALRGLKFISSKSNGVDAWNQVQSSFDSLAKDGFLYRTDFAQCIGMKDSKEFALELFDALGRRRRLSVEKISRDELSEFWSQITDQSFDSRLQIFFDMVDKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQIRGRSPIRRMSRRVMYYLQENWRRLWILAVWVSVMIGLFTWKFMDYKRKNAYHVMGYCLLAAKGAAETLKFNMALILFPVCRNTITWLRSTNLAYIAPFDDNINFHKTIAAAVLIGVILHAGNHLACDFPRLVNSSEEIYEKYLNGVFGDHKPGYGDLIKGVEGVTGILMVILMAIAFTLATKWFRRNLIKLPKPFNRLTGFNAFWYSHHLFVIVYVLLIVHGVNLYLERKWHLQTTWMYLAVPIVLYLGERTLRFFRSGFYTVRLIKVAIYTGNVLTLQMSKPPQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPGDDYLSVHIRQLGDWTQELRKVFSAACEPPVAGKSGLLRADETTKKCLPKLRIDGPYGAPAQDYRNYDVLLLVGLGIGATPFISILKDLLNNIVKMEELADLVSDSSRGSDLSTGSSDSPSFSKISPKRKKTLKTTNSYFYWVTREQGSFDWFKGVMNEVAELDQRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDVVSGTRVRTHFARPNWKKVFSRICSKHSNGRIGVFYCGAPVLAKELSKLCFEFNEKGQTKFEFHKEHF* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1654 926 SFLD NADPH oxidase subgroup (NOX) 104 926 - -
Pvu2g1654 926 PANTHER RESPIRATORY BURST OXIDASE2 28 926 - -
Pvu2g1654 926 CDD EFh 224 271 IPR002048 GO:0005509
Pvu2g1654 926 SUPERFAMILY Riboflavin synthase domain-like 601 715 IPR017938 -
Pvu2g1654 926 Gene3D - 713 926 IPR039261 -
Pvu2g1654 926 MobiDBLite consensus disorder prediction 66 93 - -
Pvu2g1654 926 Gene3D - 146 262 - -
Pvu2g1654 926 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 598 718 IPR017927 GO:0016491
Pvu2g1654 926 Pfam Ferric reductase like transmembrane component 403 559 IPR013130 -
Pvu2g1654 926 Gene3D Translation factors 591 679 - -
Pvu2g1654 926 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 719 926 IPR039261 -
Pvu2g1654 926 ProSiteProfiles EF-hand calcium-binding domain profile. 241 276 IPR002048 GO:0005509
Pvu2g1654 926 MobiDBLite consensus disorder prediction 761 778 - -
Pvu2g1654 926 CDD NOX_Duox_like_FAD_NADP 613 868 - -
Pvu2g1654 926 Coils Coil 272 292 - -
Pvu2g1654 926 MobiDBLite consensus disorder prediction 73 93 - -
Pvu2g1654 926 MobiDBLite consensus disorder prediction 760 782 - -
Pvu2g1654 926 PANTHER NADPH OXIDASE 28 926 - -
Pvu2g1654 926 ProSitePatterns EF-hand calcium-binding domain. 254 266 IPR018247 -
Pvu2g1654 926 Pfam Ferric reductase NAD binding domain 722 908 IPR013121 GO:0016491
Pvu2g1654 926 Pfam FAD-binding domain 601 715 IPR013112 GO:0016491
Pvu2g1654 926 Pfam Respiratory burst NADPH oxidase 145 244 IPR013623 GO:0004601|GO:0050664
Pvu2g1654 926 PRINTS Cytochrome B-245 heavy chain signature 504 527 IPR000778 GO:0016020|GO:0016491
Pvu2g1654 926 PRINTS Cytochrome B-245 heavy chain signature 704 717 IPR000778 GO:0016020|GO:0016491
Pvu2g1654 926 PRINTS Cytochrome B-245 heavy chain signature 727 744 IPR000778 GO:0016020|GO:0016491
Pvu2g1654 926 SUPERFAMILY EF-hand 171 324 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1654 Pvu-Chr2 30256952 30266400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1654 9 926 Miscellaneous Gene Families AT1G64060 74.392 0.0 1453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1654 K13447 - gmx:100805517 1703.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1654 2 30256952 30266400 Pvu2g1654 2 30256952 30266400 ECH
Pvu2g1654 2 30256952 30266400 Pvu2g3023 2 45729742 45739194 PCT