Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1649 ATGGGGTACCATTCGGTGTTCATTGCTGTGTTCTTATGGAGTTCAATGGTTTGTCACAATGGATTAGCCATGATGGATGATGGGAAGTTGACGAGCTCCTCAGGCCCACCTAATTATGACTATGCAGATGCTCTTGCCAAAGCTATTTTGTTTTTTGAAGGACAACGCTCAGGGAAGTTGCCCTCAAGCCAAAGAGTGAAGTGGAGGGAAGACTCCGCTCTCTCTGATGGCAAACTTCAAAACGTGAATTTGATGGGAGGATACTACGATGCTGGTGATAACGTGAAGTTTGGATGGCCAATGGCATTTTCTACTAGCTTATTAAGTTGGGCTGCTGTAGAGTACGAGAGTGAGATATCTTCCGTGAACCAGCTTGGTTATCTCCAAAGTGCTATCCGTTGGGGTGCAGACTTCATGTTGAGAGCACATACTTCCCCAACCACCCTCTATACACAGGTTGGAGATGGAAACGCTGATCACAATTGTTGGGAGCGCCCAGAAGACATGGATACACCAAGGACAGTCTATAAGATAGATGCTAATTCTCCAGGAACTGAAGTCGCAGCTGAGTATGCTGCTGCTCTTTCTGCCGCTTCAATTGTATTCAAGAAAATAGATGCCAAGTATTCCTCCACGTTATTAAGCCATTCAAAATCACTGTTTGATTTTGCAGACAAGAACAGAGGTTCTTACTCCGGTTCTTGCCCATTCTACTGCTCGTACTCAGGTTACCAGGATGAACTGCTATGGGCTGCTGCTTGGCTTTACAAGGCGAGTGGAGAAAGCAAGTATCTGAGCTACATCATAAGTAACCAAGGATGGAGCCAGACAGTGTCTGAATTCAGCTGGGACAACAAATTTGTTGGGGCTCAGACATTACTAACCGAGGAATTCTATGGTGGGAAGAAAGACTTGGCCAAGATTAAGACTGACGCTGAGTCATTTATATGCGCTGTGATGCCAGGAAGTAACTCTCGACAGATTAAAACAACTCCTGGTGGCCTTCTGTTTACCAGAGATAGTAGCAATTTGCAATATACCACAAGCTCGACCATGGTGCTATTCATTTTCTCTAGAATCCTTAACAGAAATCATATAAACGGAATCAACTGTGGCTCCTCGCATTTCACAGCGTCTCAAATTAGAGGCTTTGCGAAAACACAGGTGGAGTACATACTAGGAAAGAATCCGATGAAGATGTCGTACATGGTTGGATTTGGCAGCAAATACCCAAAGCAATTGCATCACAGAGGCTCGTCCATTCCTTCAATAAAAGTTCACCCAGCGAAGGTGGGTTGCAATGCTGGTCTCTCAGATTATTACAATTCTGCTAATCCAAATCCCAATACCCATGTGGGTGCCATTGTTGGAGGCCCCGATTCAAATGACCGTTTCAATGATGCAAGATCTGACTATTCCCACGCCGAGCCTACCACATACATCAATGCTGCTTTCGTCGCTTCAATCTCTGCTTTGCTTGCCAAAACCTAA 1491 0.4494 MGYHSVFIAVFLWSSMVCHNGLAMMDDGKLTSSSGPPNYDYADALAKAILFFEGQRSGKLPSSQRVKWREDSALSDGKLQNVNLMGGYYDAGDNVKFGWPMAFSTSLLSWAAVEYESEISSVNQLGYLQSAIRWGADFMLRAHTSPTTLYTQVGDGNADHNCWERPEDMDTPRTVYKIDANSPGTEVAAEYAAALSAASIVFKKIDAKYSSTLLSHSKSLFDFADKNRGSYSGSCPFYCSYSGYQDELLWAAAWLYKASGESKYLSYIISNQGWSQTVSEFSWDNKFVGAQTLLTEEFYGGKKDLAKIKTDAESFICAVMPGSNSRQIKTTPGGLLFTRDSSNLQYTTSSTMVLFIFSRILNRNHINGINCGSSHFTASQIRGFAKTQVEYILGKNPMKMSYMVGFGSKYPKQLHHRGSSIPSIKVHPAKVGCNAGLSDYYNSANPNPNTHVGAIVGGPDSNDRFNDARSDYSHAEPTTYINAAFVASISALLAKT* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1649 496 Pfam Glycosyl hydrolase family 9 41 487 IPR001701 GO:0004553|GO:0005975
Pvu2g1649 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 391 417 IPR018221 -
Pvu2g1649 496 PANTHER ENDO-1,4-BETA-GLUCANASE 9 494 - -
Pvu2g1649 496 SUPERFAMILY Six-hairpin glycosidases 38 494 IPR008928 GO:0005975
Pvu2g1649 496 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 465 483 IPR033126 -
Pvu2g1649 496 Gene3D - 37 496 IPR012341 GO:0005975
Pvu2g1649 496 PANTHER ENDOGLUCANASE 18-RELATED 9 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1649 Pvu-Chr2 30208551 30211877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1649 22 496 Glycoside Hydrolase AT4G23560 69.263 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1649 - - gmx:547834 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1649 2 30208551 30211877 Pvu2g1649 2 30208551 30211877 ECH