Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1622 ATGGGATCTCTTAATCTGAAATGGACGCCAGGGTGCTTGGTTTTTGGGAAGGTGGAGTCAAGTTATGATAAGTTTAATGGCAAAGAGAGAAGAGGAGCAAGATTCAAAGGAGGGCGAAGATCTGTAATTGTTGCTACGGGGCCAGCCATAGACCAGGCTCCTGCTATTGCCCAAGAGCCCTTGACAAAAGATCATCTTATTCACTACATGGCATCTGGTTGCAAGCCCAAACAAAGCTGGAGAATAGGTACAGAGCACGAGAAGTTTGGGTTTGAGCGTAACACTTTGCGTTCAATTAATTACAAACAATTATCTGCTTTACTCAATGGCATTGCCGAGAGATTTGATTGGGAAAAAATAATGGAAGGTGACAACATCATAGGACTGAAAAATGACAAGCAAAACATATCATTAGAGCGTGGTGGTCAGTTTGAGCTTAGTGGTGCGCCTTTGAAAACATTGCATCAAACTTGTGATGAGATTAATTCACATCTCTATCAGGCTAAAACTGTTGCAGATGAATTGGGAATTGGATTTTTGGGATTAGGTTATCAGCCTAAATGGAGATTGGAAGACATAATTAGAGTGCCTAAGGAACGGTATAACATTTTACAGAATCAGTTATGCAAATTCGGCTCGCCTGGACTTGAAATATTGATCATGACATGCTCAGTTCAGGTGAACCTGGACTTCAGTTCGGAAGCAGACATGATCAAGAAAATGCGTGCCAGTATTGCTTTGCAGCCTTTAGCAGCTGCCTTGTTCGCCAATTCACCTTTCAAGGATGGGGTTCCAAGTTCTTATCTCACCACCAGAAGCCATATTGGTGAGTTTGACAAACATCGCACTGGCATACTCCCCTTTGTTTTTTATGACAATTTTGGATTTGAACAGTATGTTGATTATGCTCTTGATGTGCCAATGGTGTTTGTTTATCGCGGAAACAAGTACATTGACTGTCGTGATATGTCATTCCGGGACTTCATGGCAGGTAAACTCCCTGCCATTCCAGGTCAAGTGCCAACACTAGCTGACTGGGAAAATCATCTAACAACCATATTTCCTGAGGTCAGGCTAAAGAGATACATGGAAATGAGAGGTGCTGATAATGGCCCTCTTCACATGATATGCGCAGTCCCGGCATTTTGGGTAGGTTTGCTGTATGATGAGGTTTCACTGCAAAATGTTTTAGACATGATTGCTGATTGGACCACTGAAGACCTACAGAATTTAAGGAATATGGTTCCCATAACTGGATTAAGGACTTCAATTCAAGGTAGATTGCTGAGACATATTGCAGAAGATGTGTTGAAGTGGGCAAAGGAGGGGCTGGACAGAAGAGGCTTAAATGAATCCGTTTTCTTGGATCCATTGAAGGAAGTGGTCTTCACAGGTTTCACCCAAGCAGACAAACTGTTGGAGTTGTATCATAGCAACTGGGGAAAGAACATAGATCATGTGTTCAGAGAGTGCTGCTACTAA 1482 0.4244 MGSLNLKWTPGCLVFGKVESSYDKFNGKERRGARFKGGRRSVIVATGPAIDQAPAIAQEPLTKDHLIHYMASGCKPKQSWRIGTEHEKFGFERNTLRSINYKQLSALLNGIAERFDWEKIMEGDNIIGLKNDKQNISLERGGQFELSGAPLKTLHQTCDEINSHLYQAKTVADELGIGFLGLGYQPKWRLEDIIRVPKERYNILQNQLCKFGSPGLEILIMTCSVQVNLDFSSEADMIKKMRASIALQPLAAALFANSPFKDGVPSSYLTTRSHIGEFDKHRTGILPFVFYDNFGFEQYVDYALDVPMVFVYRGNKYIDCRDMSFRDFMAGKLPAIPGQVPTLADWENHLTTIFPEVRLKRYMEMRGADNGPLHMICAVPAFWVGLLYDEVSLQNVLDMIADWTTEDLQNLRNMVPITGLRTSIQGRLLRHIAEDVLKWAKEGLDRRGLNESVFLDPLKEVVFTGFTQADKLLELYHSNWGKNIDHVFRECCY* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1622 493 PIRSF GCL 49 493 IPR035434 GO:0004357|GO:0006750
Pvu2g1622 493 Pfam Glutamate-cysteine ligase family 2(GCS2) 114 403 IPR006336 GO:0004357|GO:0042398
Pvu2g1622 493 Gene3D - 46 493 - -
Pvu2g1622 493 PANTHER GAMMA GLUTAMYL CYSTEINE SYNTHETASE 70 493 - -
Pvu2g1622 493 SUPERFAMILY Glutamine synthetase/guanido kinase 72 484 IPR014746 GO:0003824
Pvu2g1622 493 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 60 493 IPR011556 GO:0004357|GO:0006750
Pvu2g1622 493 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 70 493 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1622 Pvu-Chr2 29941014 29944925 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1622 K01919 - gmx:100775188 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1622 2 29941014 29944925 Pvu2g2977 2 45234933 45243427 PCT