Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1620 ATGAGGCATGTGAAGCCCTTGCAGTTGTTTCAGGATTTGACGAATTCAACCCACACGCAACGCGGAAGGTTGCTTGGTTTGGATGTCGGAGAGAAATATGTTGGCCTTGCTCTTTCTGACTTTGACAACAAAATTGCTTCACCTTTCAGCGTTCTCGTCAGGAAGAAGTCAAATATCAGTTTAATGGCTTCTGATTTTGCGAATCTGATATCTAAATATTCCCTGAAGGGCTTTGTTGTTGGCCTCCCTTTTGACAAACATCGGGTGTCTTGTGATGCTGGGCTAGTGAAGGTCTTAATTAATAACCTCAGTAGAACAAAAATGCTTGAAGGAGTAGAGTATACATATTGGAATGAGTGCTTCACGTCAAAGAATGTGGAATTGCTGTTAAAGCCTTTGAACTTGAATCATCCAGTACTCTCCAAGACTATTCTAGACAAGTTTGCAGCGGTAGGAATACTTCAAGGGTACCTGGATTTTGTCAACAGGAAAATGAAGCTGACAGTGAGGAACTCTTAA 519 0.4162 MRHVKPLQLFQDLTNSTHTQRGRLLGLDVGEKYVGLALSDFDNKIASPFSVLVRKKSNISLMASDFANLISKYSLKGFVVGLPFDKHRVSCDAGLVKVLINNLSRTKMLEGVEYTYWNECFTSKNVELLLKPLNLNHPVLSKTILDKFAAVGILQGYLDFVNRKMKLTVRNS* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1620 172 Hamap Putative pre-16S rRNA nuclease [yqgF]. 22 162 IPR005227 GO:0006364
Pvu2g1620 172 SMART rnase_8s 22 126 IPR006641 GO:0006139
Pvu2g1620 172 Pfam Holliday junction resolvase 23 159 IPR005227 GO:0006364
Pvu2g1620 172 SUPERFAMILY Ribonuclease H-like 22 161 IPR012337 -
Pvu2g1620 172 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 166 IPR005227 GO:0006364
Pvu2g1620 172 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 1 166 - -
Pvu2g1620 172 Coils Coil 162 172 - -
Pvu2g1620 172 Gene3D - 21 168 IPR037027 GO:0006139
Pvu2g1620 172 CDD YqgF 24 159 IPR005227 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1620 - - gmx:100305864 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1620 2 29913194 29916525 Pvu2g1620 2 29913194 29916525 ECH