Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1618 ATGACCACCGTTTCCTCCAACGATTCAAAGTCCGTGTACGATTTCTCCGTCAAGGATGCTAAGGGAGATGTTGTAGATCTTTCCACTTACGAGGGAAAAGTCTTGTTGATTATCAATGTTGCTTCTAAATGCGGCTTGACCAACTCCAATTATACAGAGCTGAATGACTTATATGCGAAGTATAAAGAGGAAGGCTTGGAGATTCTGGCATTTCCCTGTAACCAATTTGGTGAGCAAGAACCAGAAAGCAATGATAAAATTGTGGATTTTGTCTGCACTCGTTTCAAATCTGAATTCCCCATCTTTGATAAGATTGAAGTGAATGGGGGCAATTCAGCTCCTCTGTATAAATTCTTGAAGTCCGGCAAATGGGGAATTTTTGGTGATGATATTCAGTGGAACTTTGCCAAGTTTGTGGTTGATAAGAAGGGACAAGTAGTGGGTCGCTATTATCCAACGACTTCTCCTCTCAGCCTTGAGAGAGACATCCGTCAACTTCTGGGTATTTCATGA 513 0.4172 MTTVSSNDSKSVYDFSVKDAKGDVVDLSTYEGKVLLIINVASKCGLTNSNYTELNDLYAKYKEEGLEILAFPCNQFGEQEPESNDKIVDFVCTRFKSEFPIFDKIEVNGGNSAPLYKFLKSGKWGIFGDDIQWNFAKFVVDKKGQVVGRYYPTTSPLSLERDIRQLLGIS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1618 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Pvu2g1618 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Pvu2g1618 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Pvu2g1618 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Pvu2g1618 170 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Pvu2g1618 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Pvu2g1618 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Pvu2g1618 170 PANTHER GLUTATHIONE PEROXIDASE 8-RELATED 2 169 - -
Pvu2g1618 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Pvu2g1618 170 PANTHER GLUTATHIONE PEROXIDASE 2 169 IPR000889 GO:0004602|GO:0006979
Pvu2g1618 170 ProSiteProfiles Thioredoxin domain profile. 6 168 IPR013766 -
Pvu2g1618 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
Pvu2g1618 170 PIRSF Glutathion_perox 1 169 IPR000889 GO:0004602|GO:0006979
Pvu2g1618 170 Gene3D Glutaredoxin 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1618 Pvu-Chr2 29898072 29904106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1618 K00432 - gmx:100527034 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1618 2 29898072 29904106 Pvu2g2973 2 45206061 45208050 PCT