Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1584 ATGATGAAAGGTTCAAAGCGTTTGGCTGTGTCAGAACCCAACCAGGTCGATACTAACGAAGCTCCGTTCCGGAATAAAAGAATAATGGAAGGATCCCTCTTTGATGTTCATAGGGCTGAACCATCTCAACAACCAATGGTGGCAGCACCACCATTGAATATGAAACGCGCAGAGTCATCACAGCAGCATGTGAGAGCTTTAAATACCCAGTTTGCAAGTTGGGTTCAAACGCAACTAAAGAATCATCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACATAAATCATGCTTCGAGCATTATGGAAAAGTTCAGTGATGTTGTCAACTGGCTCAAAGCAAATGCATCCAAGGCGGAAAATTCAGTTCCTGATGCTGGTGCTGCTTTTTCTGGGAAAAAGCTCTTGCCTGAAGTAGTAAACAAAGAAAATATTTTTTTTGGAGGGAAAACTACTCCTGATACTACTGCTACAAATTTTGCTAGTCCATGGAGTCCTGTATTATTTTCAAGCAGTCAAAGCATTTTTGGATATGGTAGCCAAAGTTCTGCTCCCTCTAACAACAAGGCTTCGGATGATGTAGATGAAGAAAATGAATTGGAGCAGCCTAGCAGCCCATCAGTTAAGAAGACGGAAGAGAAGGGTGTAGTTGTTGTACATGAAGTGAAGTGCAAGCTTTATGTGAAGTCAAGTGATCCAGCTGATAAAGATGCATGGAAAGATAAAGGAATGGGTCAACTGTCTATTAAATGCAAAGAAGGTGTCAGCAAGGCTACCAAAGAATCCAAACCTACAATTGTTGTTCGAAATGAGGTAGGAAAAATTCTTCTCAATGCCTTGTTGTATCCAGGAATCAAGACAAACCCGCAGAAGAACTCTCTTGTTGCAATATTCCATACTGCGGGTAATGCTGACGGAAGTGGGGATAACGATAGTGTAGTTGCACGTACATTCTTGATCCGAATGAAAACCGAAGATGATCGAAATAAGCTGGCTTCAACCATCCAAGAATATGCTCCAGTATCTTGA 1029 0.4169 MMKGSKRLAVSEPNQVDTNEAPFRNKRIMEGSLFDVHRAEPSQQPMVAAPPLNMKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYINHASSIMEKFSDVVNWLKANASKAENSVPDAGAAFSGKKLLPEVVNKENIFFGGKTTPDTTATNFASPWSPVLFSSSQSIFGYGSQSSAPSNNKASDDVDEENELEQPSSPSVKKTEEKGVVVVHEVKCKLYVKSSDPADKDAWKDKGMGQLSIKCKEGVSKATKESKPTIVVRNEVGKILLNALLYPGIKTNPQKNSLVAIFHTAGNADGSGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPVS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1584 342 PANTHER RAN BINDING PROTEIN 7 340 IPR045255 -
Pvu2g1584 342 SMART ranbd_3 200 338 IPR000156 GO:0046907
Pvu2g1584 342 MobiDBLite consensus disorder prediction 180 212 - -
Pvu2g1584 342 Pfam RanBP1 domain 208 337 IPR000156 GO:0046907
Pvu2g1584 342 ProSiteProfiles Ran binding domain type 1 profile. 210 337 IPR000156 GO:0046907
Pvu2g1584 342 SUPERFAMILY PH domain-like 209 339 - -
Pvu2g1584 342 CDD RanBD_NUP50 211 339 - -
Pvu2g1584 342 MobiDBLite consensus disorder prediction 1 23 - -
Pvu2g1584 342 Gene3D - 139 341 IPR011993 -
Pvu2g1584 342 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 7 340 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1584 K14295 - gmx:100816975 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1584 2 29511285 29520814 Pvu2g1584 2 29511285 29520814 ECH