Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1572 ATGTCTTCTGATAGCACAAAGGAAAATGCGTCGGTAGTTGATTCATCAGTCACTGAATGGAGGAATGACATTGGAAATTCAGATGATCCAGAGAGCTCCTGTTACAAGTTTAATGAAAATAATAATCCAATTCGGGCAGATATAGCGGGACACTCTTATGGTCTGGTAGGGCATCCAACAGGAATTGGAGTGGAAAAATGGAATGATATTAAGTATTTCATCATTAAGAGTTTGAACCGTGAAAATATCGATTTGTCTATTAAGAAAGGAATTTGGGCTACTCAAATCATGAATGAACGGATTCTAGAAGAAGCTTTTCATAACTCGGGCTGTGTAATCCTTATATTTAGTGTCAACATGAGTGGTTCCTTCCAAGGATATGCACAAATGATGTCCTCCATTGGAAGGGGTAGAGACAATGTTTGGAGTGAGGGAATTGGTAAAAGTAATCCTTGGGGCCGCAGTTTTAAGGTCCAGTGGCTGTGTTTCAATGATTTGCCTTTCTACAAGACTCTACATCTCAAGAATCCATTGAATGACTATAAGCCTGTCAAAATTAGCAGAGACTGTCAGGAGTTATCTCCAGACATTGGCCTAGCTCTTTGTGAACTCCTTGATGGTAAGAACGATACAAATGACCTACTGACCAGTTCATCAAGGGATGATTTTTCATTTAAGGGCCGCTATGTGAATACTCCAAGTTCAATGGGAGACGAAGACTGTAATTTTCCTCCATATCCTATGTCATGGTCAATGCCCCTGCCTTATTCTTCCATGTTTTACCAAAATCAACCTGTAGTAAATGAATTTCGTTCAACAAAGCAGAGATTCAGTGGGACAATGCTTACTGAAACATTGCCTATCAATTCTTGTGTGTCGCCACAAGTGTCAGGGATTAAACGTGCTCATTATAGTGGACATATTCCAGAGATACAAACAAAGAAGGACGTGGCTTGTCAATTAGATTTTTGGGGTGTGTCTCCAGGCTGCCCTTTAGCTGGTAGTACCCTAACTGAGGATGATTTTCTTGACATGTCCTATGAAGAATACCTGGAGGAGGTGCATAGCAGAGGCAGGAAACAGTTACGGATCAGTGCAACTAAACCATGTTTGAAATGA 1119 0.4057 MSSDSTKENASVVDSSVTEWRNDIGNSDDPESSCYKFNENNNPIRADIAGHSYGLVGHPTGIGVEKWNDIKYFIIKSLNRENIDLSIKKGIWATQIMNERILEEAFHNSGCVILIFSVNMSGSFQGYAQMMSSIGRGRDNVWSEGIGKSNPWGRSFKVQWLCFNDLPFYKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDGKNDTNDLLTSSSRDDFSFKGRYVNTPSSMGDEDCNFPPYPMSWSMPLPYSSMFYQNQPVVNEFRSTKQRFSGTMLTETLPINSCVSPQVSGIKRAHYSGHIPEIQTKKDVACQLDFWGVSPGCPLAGSTLTEDDFLDMSYEEYLEEVHSRGRKQLRISATKPCLK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1572 372 Pfam YT521-B-like domain 71 205 IPR007275 GO:0003723
Pvu2g1572 372 Gene3D ph1033 like domains 63 218 - -
Pvu2g1572 372 MobiDBLite consensus disorder prediction 1 25 - -
Pvu2g1572 372 PANTHER YTH DOMAIN-CONTAINING PROTEIN 1 9 318 - -
Pvu2g1572 372 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 9 318 IPR045168 -
Pvu2g1572 372 ProSiteProfiles YTH domain profile. 70 205 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1572 Pvu-Chr2 29349475 29353426 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1572 K20100 - gmx:100784130 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1572 2 29349475 29353426 Pvu2g1572 2 29349475 29353426 ECH