Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1568 ATGAGAGTGATAGTGCCTCTGCAGGGGGTTGTTCAAGGCACAGGAGGTCTTTTCTGGGGTTCGGTCATTCCTTGTGCCCTCTTCTACTTTCTTCAACTCTTCTTCAAAACCAAGACACGTCACCACCAACCACCACCCTCCCACAACCACAAGGAGGATTCCACCACCTTCCACCGCTCTCTCTCTCTCACTCCAAGGCACTCCTCTGCCTCTGCTTACGTCTCCCCTCGAGCCAATTCCATAACCGCTGCTAACTCTTCTTACCATCTAGCTTTCAACAAGGTCGCTGATGATCCCTACCACGAAACTCATAATCCCGATGGTGTTATTCAACTCGCTTTGCACCAAAACACCCTATCTCTTGATTTTATTCAAGATTGGATTCACTGCAACGGAAGCGCTGCTATATTAGGAACACCTCTCAACATTTCTAGGATTGTTCCCTACCAACCTCTCGATGGATTGATGGAGCTTAAACTGGCTGTGGCTGGTTTCATGCCTCAAGTTTTGGAAAAGCCGATTTTCTTCAACACTTCGCGAATGGTACTGACTGCAGGTGCCACCTCTGCTATTGAGATTCTGAGCTTCTGCCTAGCAGATCAGGGAAATGCATTCCTTGTTCCCACGCCTCTTAGCCCCGGTTTTGACGAGGTTGTAAAATGGCGCACTGGAGCCGAGATAGTACCTGTTCCATGTCGCAGTGCTGATGACTTCAATTTAAGTATAACTTCACTTGAGAGAACCTTCAATCAAGCAAAGATGCGTGGTCAAAAAGTTCGTGGAATTATAATGACCAACCCCTCAGACCCTGCTGGCAAATTGTTGAATCGGGAAACACTGTTGGATCTTTTGGACTTTGCTAGAGAGAAGAACATTCACATAATCTCCAATGAAATGTTTGCAGGCTCTACTTATGGTAATGAAGAATTTGTGAGCATGGCAGAAATCATGGAGGCAGAAGATCATGATCGGGACAGAGTTCATATAGTGTTTGATTTATCCAATGAGCTTTCTCTTCCAGGTTTGAAGGCGGGTGTTATCTACTCCTACAATGACAGTGTCGTGGCTGCTTCTACCAAATTGGCAAGGTTCTCCACTGTTTCTGTCCCAACTCAAAGATTGCTTATCTCCATGCTTTCAGATACAACTTTTGTTCAAAAGTTTATTGAGGTTAACAGATTGAGGCTGCGGAAAATGTATAATGTATTTGTGACAGGGTTGAAGCAGTTGGGAATTGAGTGCACTAGGGGCAGTGGTGGTTTTTGCTGCTGGGCTGACATGAGCAGGTTGATTCGGTCTTACAGTGAAAAGGGGGAGCTTGAGCTGTGGGATAGATTGTTGAATGTTGTTAAGATCAATGTTACCCCGGGTTCCTCATGTCACTGTATTGAACCTGGATGGTTTCGTTTTTGTTTTGCTACATCAACTGAAAAGGATATTTCTGTAGTGATGGAACGGATTTGGAGAATTTCTGATTCAGCAAAGTGA 1488 0.4503 MRVIVPLQGVVQGTGGLFWGSVIPCALFYFLQLFFKTKTRHHQPPPSHNHKEDSTTFHRSLSLTPRHSSASAYVSPRANSITAANSSYHLAFNKVADDPYHETHNPDGVIQLALHQNTLSLDFIQDWIHCNGSAAILGTPLNISRIVPYQPLDGLMELKLAVAGFMPQVLEKPIFFNTSRMVLTAGATSAIEILSFCLADQGNAFLVPTPLSPGFDEVVKWRTGAEIVPVPCRSADDFNLSITSLERTFNQAKMRGQKVRGIIMTNPSDPAGKLLNRETLLDLLDFAREKNIHIISNEMFAGSTYGNEEFVSMAEIMEAEDHDRDRVHIVFDLSNELSLPGLKAGVIYSYNDSVVAASTKLARFSTVSVPTQRLLISMLSDTTFVQKFIEVNRLRLRKMYNVFVTGLKQLGIECTRGSGGFCCWADMSRLIRSYSEKGELELWDRLLNVVKINVTPGSSCHCIEPGWFRFCFATSTEKDISVVMERIWRISDSAK* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1568 495 PANTHER AMINOTRANSFERASE ACS10-RELATED 2 493 - -
Pvu2g1568 495 SUPERFAMILY PLP-dependent transferases 88 490 IPR015424 -
Pvu2g1568 495 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 493 - -
Pvu2g1568 495 MobiDBLite consensus disorder prediction 41 60 - -
Pvu2g1568 495 CDD AAT_like 149 487 - -
Pvu2g1568 495 Gene3D Aspartate Aminotransferase, domain 1 98 486 IPR015422 GO:0003824
Pvu2g1568 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 112 138 - -
Pvu2g1568 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 143 159 - -
Pvu2g1568 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 180 200 - -
Pvu2g1568 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 202 223 - -
Pvu2g1568 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 256 280 - -
Pvu2g1568 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 292 315 - -
Pvu2g1568 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 326 350 - -
Pvu2g1568 495 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 358 381 - -
Pvu2g1568 495 Pfam Aminotransferase class I and II 148 487 IPR004839 GO:0009058|GO:0030170
Pvu2g1568 495 Gene3D - 132 381 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1568 Pvu-Chr2 29319064 29322815 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1568 K14270 - gmx:100783490 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1568 2 29319064 29322815 Pvu2g1568 2 29319064 29322815 ECH