Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1561 ATGTCAGCAACATGCAAACTAGGAGACAACCTAAGCTTAAACGATGAAACCAACCAACCCTTCTCACCTCCTCCTCCACTACACGCCCAAAAATATGAAGCCAATTCATTGAAGATGGTGATCTCAGAGCTAAGAGTTCAACGAGGTATAGCCCTCCCAATGGTGGCCATGAATTTGGCTTGGTTTGCCAAGACAGCCATCACAACAGCTTTTTTAGGCCGTCTCGGGGAGCTCAGTTTGGCAGGTGGAGCTCTCGGCTTCACCTTTGCTAATGTGACTGGATTCTCTCTTCTCAATGGTCTATGCGGTGCCATGGAACCCATATGTGGCCAGGCTCATGGTGCCAAAAACTTCAGGCTCCTTCACAAGACCCTTTTCATGACAATCTTATTGCTGTTGTTGGTATCACTTCCCATCACTTTCTTGTGGCTTAATGTTGACAAAATTTTGATTTGTTTTGGGCAACAGCAAGACATCTCCATTGTGGCCAGGACCTATCTTTCCTCTCTCATACCCGACTTGTTTGTTGCCTCGCTCTTCTGTCCCTTAAAAGCCTACTTGAGCTCTCAGAGCATAACTCTTCCCACCATGTTTAGTTCGGTTGTGGCACTAGCTTTCCACATACCCGTTAACATAGTGCTTTCAAAGACCATGGGCCTCAGAGGAGTCTCCATGGCGGTTTGGGTTACTGACCTTATTGTTGTGGTTCTGCTAGCCATTTATGTTTTAATTATTGAGAACAAAAAGGGAAGCATGTGGAAGGAAGGAGGGTGGTGGGATCAGAGCATTGAGGATTGGATTAGGCTGGTCAAGCTTTGTGGATCATGCTGCCTCAATACATGCCTTGAGTGGTGGTGCTATGAGATCCTAGTTTTGCTTACTGGCCACCTCACAAATGCTAAGCAAGAAGTGGGAGTTTTGGCCATTGTGCTAAACTTCGACTATTTGCTTTTCTCAGTGATGCTGTCACTAGCCACATGTGTTTCCACCCGTGTCTCAAATGAGCTTGGTGCTAACCAAGCTGGAATTGCTTACCGATCAGCGTATGTGTCTCTGGCATTGGGCTTCATCTCTGGTTGCATAGGCAGTTTGGTGATGGTGGGTGCCAGGGGAATTTGGGGGCCACTGTTTAGCCATGATAGGGGAATTATAAAGGGAGTAAAAAAGACAATGCTGCTGATGGCTCTGGTGGAAGTGTTTAATTTTCCGTTGGCAGTTTGTGGAGGCATAGTTCGAGGAACAGCACGACCTTGGTTGGGCACTTATGCGAATCTAGGTGGATTTTATTTCCTGGCCCTTCCACTTGCCATTGTTTTTGCCTTCAAACTCCGTCTTGGGCTAGTTGGACTCTTCATTGGACTTCTTACTGGTATAGTTACCTGCTTGACGTTGTTATTGGTATTTATTGCACGGATAAACTGGGCGGAAGAAGCTGCCAAGGCACAAACACTATCAAGCAAAGAGCAGGTTAAGGAACTCCTCAAATATGACGCAGAAAAACAAATAGACGTCCGTGAAAAAGAATAA 1527 0.4604 MSATCKLGDNLSLNDETNQPFSPPPPLHAQKYEANSLKMVISELRVQRGIALPMVAMNLAWFAKTAITTAFLGRLGELSLAGGALGFTFANVTGFSLLNGLCGAMEPICGQAHGAKNFRLLHKTLFMTILLLLLVSLPITFLWLNVDKILICFGQQQDISIVARTYLSSLIPDLFVASLFCPLKAYLSSQSITLPTMFSSVVALAFHIPVNIVLSKTMGLRGVSMAVWVTDLIVVVLLAIYVLIIENKKGSMWKEGGWWDQSIEDWIRLVKLCGSCCLNTCLEWWCYEILVLLTGHLTNAKQEVGVLAIVLNFDYLLFSVMLSLATCVSTRVSNELGANQAGIAYRSAYVSLALGFISGCIGSLVMVGARGIWGPLFSHDRGIIKGVKKTMLLMALVEVFNFPLAVCGGIVRGTARPWLGTYANLGGFYFLALPLAIVFAFKLRLGLVGLFIGLLTGIVTCLTLLLVFIARINWAEEAAKAQTLSSKEQVKELLKYDAEKQIDVREKE* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1561 508 PANTHER PROTEIN DETOXIFICATION 56 32 490 - -
Pvu2g1561 508 PANTHER MULTIDRUG RESISTANCE PROTEIN 32 490 - -
Pvu2g1561 508 CDD MATE_eukaryotic 43 480 IPR045069 GO:0042910|GO:1990961
Pvu2g1561 508 TIGRFAM matE: MATE efflux family protein 53 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g1561 508 MobiDBLite consensus disorder prediction 1 27 - -
Pvu2g1561 508 Pfam MatE 53 212 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g1561 508 Pfam MatE 276 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g1561 508 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1561 Pvu-Chr2 29215961 29217487 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1561 K03327 - gmx:100804083 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1561 2 29215961 29217487 Pvu2g1561 2 29215961 29217487 ECH