Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1559 ATGGAATGGCCTGCGTGCACGGACGAATACGAAAAACTTGTAATACGGATGAGCACTCCCAGGGTTGTTATTGACAATTCCGTGTTCTCTTCAGCTACTCTAGTCAAGGTTGACAGCGCTAGAAGACATGGTATTTTATTGGATGCTGTACAGGTGCTCACTGACCTGGATCTTTCTATAAAGAAAGCCTATATTTCTGCTGATGGCAAGTGGTGTATGGATGTTTTTCATGTCACTGATCAAAACGGAAACAAGATAACGGACGAAAGCGTTTTAAAATATATTGAGCAGTCACTTGGGAGCATTCACTATGGGAGAACCAACAGTTCTAATGGTCTCACTGCGCTGGAATTGACAGGAACTGACCGAGTTGGTCTTTTATCGGAGGTGTTTGCCGTACTGGCTGATCTTCAATGTGATGTGGTTGAGGCCAAGGTTTGGACTCACAATGGGCGTATTGCTTCCTTAATTTATGTGAAAGACTCTAGTTCTGGGTCTGCTATTGAGGACTCTCAGAAATTTAATAAGATTGAACTGCGCTTAAGAAATGTTTTGAAGGGAGACAATGACATCAGAAGTGCAAAAATTTCTGTTTCTATGGCTGCGATGCACACTGAAAGAAGGCTACATCAAATGATGTTCACGGACCGTGATTATGAGAGGACTCCCATTCTTGAGGTTACTTCTGATAGCCCAGTGGTGACGGTTCAGAATTGGGCAGGAAGGGGCTATTCAGTCGTGAATGTTCAGTGCAAAGATCGAACCAAGCTTTTATTCGATGTTGTATCCAATTTGACAGACATGGAATATGATGTATTTCATGCAACTATTAACACAAATGATGACCGAGCATACTTGGAGTTTTACATAAGACACAAAGATGGCACTCCAATTAGCTCAGAACCAGAGCGTCAACGCGTAATTCAATGCTTAAAAGCTGCTGTAGAGAGAAGGGCATCTGAGGGTGTTCGACTAGAGTTATGCAAAGAAGACAGGCAGGGGCTTCTAGCAGAAGTAATGAGAACTTTCCGCGAGAATGGGCTGAATGTGACCAGGGCTGAGATATCCACTGTAGGGAACATGGCTACAAATATATTCTATGTGACGGATGCGGTTGGAAATCCAGCTGATTCAAAAATTATCGAATCTGTTAGGCAGAAAATTGGGTTAAGCAATTTAGAAGTGAAGGAATTGCCGTTGATAAACCATCAGGAGATACAGAGAGAGGATGAAGCGGTTGGAATTGGTGGGGCAGTGTTGTTGTCCATAGGGAGTCTTGTGAGAAGAAATCTATACAATTTGGGATTAATCAAATCCTGTTCCTGA 1326 0.4268 MEWPACTDEYEKLVIRMSTPRVVIDNSVFSSATLVKVDSARRHGILLDAVQVLTDLDLSIKKAYISADGKWCMDVFHVTDQNGNKITDESVLKYIEQSLGSIHYGRTNSSNGLTALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDSSSGSAIEDSQKFNKIELRLRNVLKGDNDIRSAKISVSMAAMHTERRLHQMMFTDRDYERTPILEVTSDSPVVTVQNWAGRGYSVVNVQCKDRTKLLFDVVSNLTDMEYDVFHATINTNDDRAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCKEDRQGLLAEVMRTFRENGLNVTRAEISTVGNMATNIFYVTDAVGNPADSKIIESVRQKIGLSNLEVKELPLINHQEIQREDEAVGIGGAVLLSIGSLVRRNLYNLGLIKSCS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1559 441 SUPERFAMILY ACT-like 110 170 IPR045865 -
Pvu2g1559 441 Pfam ACT domain 116 168 IPR002912 -
Pvu2g1559 441 Pfam ACT domain 328 384 IPR002912 -
Pvu2g1559 441 ProSiteProfiles ACT domain profile. 324 408 IPR002912 -
Pvu2g1559 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 439 IPR040217 -
Pvu2g1559 441 ProSiteProfiles ACT domain profile. 115 199 IPR002912 -
Pvu2g1559 441 SUPERFAMILY ACT-like 244 311 IPR045865 -
Pvu2g1559 441 SUPERFAMILY ACT-like 320 394 IPR045865 -
Pvu2g1559 441 Gene3D - 320 394 - -
Pvu2g1559 441 PANTHER [PROTEIN-PII] URIDYLYLTRANSFERASE-RELATED 1 439 - -
Pvu2g1559 441 ProSiteProfiles ACT domain profile. 34 109 IPR002912 -
Pvu2g1559 441 CDD ACT_ACR_3 244 318 - -
Pvu2g1559 441 CDD ACT_ACR_4 322 393 - -
Pvu2g1559 441 Gene3D - 113 186 - -
Pvu2g1559 441 CDD ACT_ACR_1 32 103 - -
Pvu2g1559 441 SUPERFAMILY ACT-like 30 97 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1559 Pvu-Chr2 29194391 29197493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1559 - - gmx:100780903 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1559 2 29194391 29197493 Pvu2g1559 2 29194391 29197493 ECH