Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1551 ATGGCGTTGTTGGAGGAGAAGCGAGTGGAGGATGAGTTATCGTACCCGATTATGGTGGCGGAGCGAGTTCGCTCGGCGGTGGACGAGGCCGACTCGTTCAAACTTGAGTGCTCGGAGGTGTGGAAGCAGGTCGATCGCCTCCTCCAAATGCTCCGAACCCTCGTCCGCTTCGCCACGGCCACCACCACCTCCGCCGCGTCGCCGCCGCTCTACGAGCGTCCCATCCGCCGCGTTGCTGCCGAGACGGCGAAGAATCTCGACCGCGCTCTCGCCCTCGTGCGCAAGTGCAAGCGTCGGAGCATCCTGCACCGTGTCGTCTCCATCGTCAGCGCCGCCGATTTCCGGAAAGTGCTGGTCCACCTGGACGCGTCCGTGGGTGATATGAAGTGGCTCCTCAGCATCTTCGACGCCGACGGCGGCATTGTCCTCTCCCTCCCCCCGATCGCCAGCAACGACCCCATTCTATCTTGGGTATGGTCTTTCATCGCTTCCCTTCAAATGGGTCAATTAAACGATAGAATTGAGGCTGCGAATGAACTTGCTTCTTTAGCTCAAGATAACGATAGGAATAAGAAGATCATTGTTGAGGAATGCGGGGTGTCTCCTTTGTTGAAGCTTTTCAAGGAAGGCACTTCCCCTCCTGCTCAAATTGCTGCTGCCAGTGCTTTGTGTCATTTGGCTAATGATTTGGAAAGGATTAGAGTGATTGTGAGTGAGCTTGGTGTGCCTGCTGTTGTGCAGGTTCTCAGTGACTCCCCCATGAGGGTTCAGACCCTGGCTGCCAATTTGGTTGCCAGGATGGCCAAGCATGACCCCATGGCTCAGGAGGATTTCGCCCGAGAGAACGTGATTAGACCTCTTGTGACACTCTTGTCGTTTGACTCCTTTGTGGATGATCAATTGGGGCATTTGGGGAAGCAAAGTATTCATTCCATTGTTCAGATTAATAAGGAGTTGGGAAAGGGTAGTAGCCGGGGAGGTCGCCATTTTTCGAATTCCTACTCGAATTCGTATTTGTTTATGGAGGGAAGTAGCCGGGGAGGGAATCATAGGAAGGAGAGGGAGAATGAGGATCCTGCGGTAAAGCTTCAGCTTAAGGTTAGTTGCGCTGAGGCGTTGTGGATGCTTGCGCGAGGGAGTGTGATCAACAGTAGGAAGATAACTGAGACCAAAGGGATGCTTTGTTTGGCTAAGATTGTTCAGAATGAGCAAGGAGAGCTGCAGTATAATTGCTTGATGACGATAATGGAGGTAACCGCAGCTGCTGAATCCAATGCTGACCTTCGTCGAGCAGCGTTTAAGACCAATTCTCCAGCTGCAAAGACTGTTGTTGAACAGCTGCTGAGGATAATTAAAGAGGTGGATAACCCGGCAATGCAAATTGCAGCTATGAAGTCCATTGGTGCGTTGGCTAGGACATTTCCTGCTAGAGAGACTCGGGTAATTGAACCTCTGGTGTCACAGATGAGTAGCAGAAATGCGGAAGTAGCAGATGAGGCAGCAGTTGCTCTTACCAAATTTGCTTGTCCGGATAATTTCCTACATGTGGAGCATTCTAAGACGATAATTGAATTCAACGGCATTCCGGCACTGATGAGACTGCTTAGGAGTAATGAAATTACCCAGATGCATGATGGGCTAACTCTTCTTTGCTTCCTTGCACTTCATGCCGGCAACAGTGAGTCCTTGGAACAAGCTAGGGTGTTGACAGTGCTAGAAGGTGCAGACAGAACAGTGCTTCCTCAGCATATAAAGGAATTGGTCTCCAGGGCAATAATCCACCTTAATTTGTATCATGCAGGAATGAATTCTCAAAGGATGCCATATTTGCCTTGA 1836 0.5082 MALLEEKRVEDELSYPIMVAERVRSAVDEADSFKLECSEVWKQVDRLLQMLRTLVRFATATTTSAASPPLYERPIRRVAAETAKNLDRALALVRKCKRRSILHRVVSIVSAADFRKVLVHLDASVGDMKWLLSIFDADGGIVLSLPPIASNDPILSWVWSFIASLQMGQLNDRIEAANELASLAQDNDRNKKIIVEECGVSPLLKLFKEGTSPPAQIAAASALCHLANDLERIRVIVSELGVPAVVQVLSDSPMRVQTLAANLVARMAKHDPMAQEDFARENVIRPLVTLLSFDSFVDDQLGHLGKQSIHSIVQINKELGKGSSRGGRHFSNSYSNSYLFMEGSSRGGNHRKERENEDPAVKLQLKVSCAEALWMLARGSVINSRKITETKGMLCLAKIVQNEQGELQYNCLMTIMEVTAAAESNADLRRAAFKTNSPAAKTVVEQLLRIIKEVDNPAMQIAAMKSIGALARTFPARETRVIEPLVSQMSSRNAEVADEAAVALTKFACPDNFLHVEHSKTIIEFNGIPALMRLLRSNEITQMHDGLTLLCFLALHAGNSESLEQARVLTVLEGADRTVLPQHIKELVSRAIIHLNLYHAGMNSQRMPYLP* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1551 611 PANTHER ARMADILLO REPEAT ONLY 4 8 606 - -
Pvu2g1551 611 Gene3D - 161 321 IPR011989 -
Pvu2g1551 611 Gene3D - 11 134 IPR036537 GO:0007166
Pvu2g1551 611 SUPERFAMILY ARM repeat 167 572 IPR016024 -
Pvu2g1551 611 SMART arm_5 186 228 IPR000225 GO:0005515
Pvu2g1551 611 SMART arm_5 515 552 IPR000225 GO:0005515
Pvu2g1551 611 SMART arm_5 469 509 IPR000225 GO:0005515
Pvu2g1551 611 SMART arm_5 229 269 IPR000225 GO:0005515
Pvu2g1551 611 Coils Coil 167 187 - -
Pvu2g1551 611 Gene3D - 351 595 IPR011989 -
Pvu2g1551 611 PANTHER ARMADILLO REPEAT ONLY 4 8 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1551 Pvu-Chr2 29107927 29110371 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1551 - - gmx:100779659 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1551 2 29107927 29110371 Pvu2g1551 2 29107927 29110371 ECH