Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1539 ATGCCAAGCAAGGAGGATTCACCATTAGAAGAAGCAAATCTTCCACTGCTGGAAGATGAAAGAGATGATGAACAAGACCAAAAACTGGCACCAAGGTTTTGGATGGAGTCAAAGAAGCTTTGGCACATAGTAGGCCCTTCAATTTTGAGCCGCGTTTTATCCTATTCCATGTTAGTCATCACCCAAGCCTTCGCTGGCCGTCTCGGTGACCTCGAACTCGCCGCCATCTCCATTGCCAATAATGTCGTCGTTGGCTTCGACTTTGGCCTCTTGTTGGGTATGGCAAGTGCCTTAGAAACGCTGTGTGGGCAAGCCTTTGGAGCGAAAAAGTACTACATGTTAGGCATTTACATGCAGCGTTCGTGGATCGTTCTTTTCATTTGCTGTATCTTGCTTTTGCCTCTGTACTTGTTTGCCTCGCCGGTGTTGAAGCTGTTGGGGCAGCCCGATGAGCTGGCGGAGTTATCCGGTACGGTGTCGATATGGATGCTACCGGTGCACTTCGCGTTTGCGTTTCAGTTCCCTCTGCAGAGGTTCTTGCAGTGCCAGCTGAAGACTGCGCCTATTGCGTGGGTGTCTCTGGTGGCGCTCTTGGTGCATGTGTTCGTGAGCTGGTTGTTCGTGTTCAAGCTCGAGTTCGGAGTTATTGGCGCTGCTGCAACCATTAACTTCTCGTGGTGGGTCCTCACCTTGGGGCTTTTTGGCTACAGCGTTTGGGGTGGGTGCCCTCTCACTTGGACTGGTTTTTCAGTTGAAGCTTTCTCTGGCCTTTGGGACTTTCTCAAACTCTCTGCTGCTGCTGGAGTCATGCTCTGCTTGGAGAATTGGTATTACAAAATTCTGATAGTGATGACGGGGAACCTTGAGAATGCAGAGATTGCTGTGGATGCTTTATCCATATGTATGACCGTCAATAGCTTGGAGTTGATGATTCCTCTGGCATTCTTTGCTGCAACAGGAGTGAGAGTTGCAAACGAGCTTGGAGCTGGGAATGGAAAAGGAGCCAAGTTTGCTACTACAGTATCTGTGGTAACATCGGTTATTATAGGACTCTTCTTCTGGATGTTGATTTTGATATTGCATGATAAATTCGGCTACATATTCTCCAATAGCAAACCTGTCCTTGACCAAGTCAACGACCTTTCTCTTCTATTAGCCTTCACAATTCTGCTCAACAGTGTTCAACCAGTTCTCTCAGGAGTGGCTGTAGGATCAGGTTGGCAATCATATGTGGCATACATAAACTTGGGTTGCTACTATATTATTGGGGTGCCTCTTGGATTTTTGATGGGCTGGGTTTTCAAACTAGGAGTTATGGGAATCTGGGCGGGGATGATTTTTGGTGGCACGGCTACTCAGACATTAGTATTGAGCATCATTACCATTCAGTGCGACTGGGAAAAAGAGGCTGAGATCGCAAAAATGCGTTTAACCAAGTGGGCAGATCCAAAACAGGAACTCAACTAA 1467 0.4744 MPSKEDSPLEEANLPLLEDERDDEQDQKLAPRFWMESKKLWHIVGPSILSRVLSYSMLVITQAFAGRLGDLELAAISIANNVVVGFDFGLLLGMASALETLCGQAFGAKKYYMLGIYMQRSWIVLFICCILLLPLYLFASPVLKLLGQPDELAELSGTVSIWMLPVHFAFAFQFPLQRFLQCQLKTAPIAWVSLVALLVHVFVSWLFVFKLEFGVIGAAATINFSWWVLTLGLFGYSVWGGCPLTWTGFSVEAFSGLWDFLKLSAAAGVMLCLENWYYKILIVMTGNLENAEIAVDALSICMTVNSLELMIPLAFFAATGVRVANELGAGNGKGAKFATTVSVVTSVIIGLFFWMLILILHDKFGYIFSNSKPVLDQVNDLSLLLAFTILLNSVQPVLSGVAVGSGWQSYVAYINLGCYYIIGVPLGFLMGWVFKLGVMGIWAGMIFGGTATQTLVLSIITIQCDWEKEAEIAKMRLTKWADPKQELN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1539 488 MobiDBLite consensus disorder prediction 1 24 - -
Pvu2g1539 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 19 478 - -
Pvu2g1539 488 TIGRFAM matE: MATE efflux family protein 46 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g1539 488 CDD MATE_eukaryotic 36 471 IPR045069 GO:0042910|GO:1990961
Pvu2g1539 488 Pfam MatE 268 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g1539 488 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu2g1539 488 PANTHER PROTEIN DETOXIFICATION 19 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1539 Pvu-Chr2 28899884 28904418 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1539 K03327 - gmx:100796652 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1539 2 28899884 28904418 Pvu2g1539 2 28899884 28904418 ECH