Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1456 ATGTGTTTCTCACTCTCTTCACCTGCTAAGTCCGCAGAGGGGCCAATGGAGGTTTCTCCCGCAACGAATTTCTTTCCCCAACCTCTATGTCCCTCAGAATCGGTCGGCGGTTGTTGCGATCATTCTGGTCAGTTATCGGCCGTCGGCCAATCTACTCTTCCGGTGGGTTACGGTGTTGGCGGGGAGGGCGCTGACCAAGAAGATTCTAATACGGCCTCACAGTTCCGGCAGCTCAACAACGATTCGACTTTGCCCTTGGCTTCGTGTTCACCGGTCTCGGCGGTGGCGCCGGAATCTTGGGTTCCTAACCAAGGGAACTGGCTCTTAGACGAGAACGAGGGTTCAATGGGTGCAGAATCTGTCTATGAATTTGGGCCTTCTAACATGGGAGCAGGGCTTTCGAATCTTGGCAATACATGTTTTCTTAATGCTATTCTGCAGTGCTTTACACATACAGTGCCTCTAGTGCAGGGTATTCGTGCGTGTACTCATAATTTCCCTTGTGCTGGTCATATGGATCGCTTCTGTGTTATCTGCACTTTTCGTGACCAAGTTGAACGTTCCTTGGCTGCTTCTGGACGCACTCTCTCACCTTTGAAATTTGTGAACAATTTGAGCTATTTTTCTTCTGGATTTAGAAGATATCAGCAGGAGGATGCCCATGAATTCATGCAGTGTGCCTTAGATAAACTGGAAAGGTGTTTCCTAGATTTGAAGAAGACTGATTTAAATTTTGAAGGGGATAATCTTGTACAGAAAGTATTTGGAGGTCGTCTCATTAGCAAACTTCAATGTTGTAGCTGTGGTCGCACTTCAGACACTTATGAGCCATTAATTGACATGAGTTTAGAGATAGAAAATGTAGATTCTCTTCCAAGTGCTCTGGAATCTTTTACTAAGGTGGAAAAGATTGATGCAAACTTTAGATGTGATAGCTGCAAGGAAGAAGTGTCCATGGAGAAACAGCTTATGTTGGATATGACACCGTCAGTTGCAGCATTTCATTTAAAGAGATTTAAGGCAGATGGGATTCTTGTTGAGAAGATTGATAAGCATATTGAATTCCCATTGGAGTTGGACTTGCAGCCTTACACCATTTCTAATCAAAACAATGACGTACTGGTGAAATATGATTTATATGCCATTGTTGTGCATACTGGTTTTTCTTCTACTTCAGGGCATTACTTCTGCTTTGTTCGCTCTGGTCCAGACACATGGCACAAGTTGGATGATTTGATGGTTACTGAGGTATCAGGAGACTCTGTACTGTCTCAGGAAGCGTACATACTGTTTTATGCAAGACAGGGTACTCCGTGGTTTTCTAGTATTATGGAATCTCAAAAACAATGCCTGGATCCAAATATTTCAAGTACATCTCCTACATCTGTTTTAGACGTTGGTGATGGCATATCTAAATCAAATCCTAATTTAATTCCAAGTACTGAAAGAGGTGGGGCTGGTGAATCCAAAGGATGTTCTGAGCCTCGGTTTGATTATTTTATTCCAGACGAACGTACTTTTACTGAAATAAATGACGCTAAAGATGCTACTCATAGCTGTGGACAATTTCTCTGTGAGCCAAATCAGGAAAGCGTTTATTTCCTTAGCAGCTCTAAAGATGTTGAAACCCAATTCAGGAACAGGGTGACCTTGGATGGTCGTTCCATGTTTGATGGAAAATCATATACTGAGAATGCTAGTCTTGATAATAACTATGACTGTGAGGAAGTTGTTGATTTTAGAGAGAGTGCTGGTGCTTGTTCATTATCTCTGCCTCCGCCTCCGCTCACCTCCCCTCTTGATAATGCTTCAGATAAATTTCGTACCTCACGTGATAATTCGAAGAAGGAGAGCAAGCAGAGCCGTAAAAGACCAGTCAATCAGTGTAACGAGAATCCTGAACGACGAGAAGCTGTGAAATATCTTAATAAGACTGGTCCAAGGAGAGAGGCACTTTTGAAATATGTTGCTCGAGATGAAGTTTCAGACAAGAGAAAAAAAATGGATTCATTGCAGTATGGATAG 2025 0.4281 MCFSLSSPAKSAEGPMEVSPATNFFPQPLCPSESVGGCCDHSGQLSAVGQSTLPVGYGVGGEGADQEDSNTASQFRQLNNDSTLPLASCSPVSAVAPESWVPNQGNWLLDENEGSMGAESVYEFGPSNMGAGLSNLGNTCFLNAILQCFTHTVPLVQGIRACTHNFPCAGHMDRFCVICTFRDQVERSLAASGRTLSPLKFVNNLSYFSSGFRRYQQEDAHEFMQCALDKLERCFLDLKKTDLNFEGDNLVQKVFGGRLISKLQCCSCGRTSDTYEPLIDMSLEIENVDSLPSALESFTKVEKIDANFRCDSCKEEVSMEKQLMLDMTPSVAAFHLKRFKADGILVEKIDKHIEFPLELDLQPYTISNQNNDVLVKYDLYAIVVHTGFSSTSGHYFCFVRSGPDTWHKLDDLMVTEVSGDSVLSQEAYILFYARQGTPWFSSIMESQKQCLDPNISSTSPTSVLDVGDGISKSNPNLIPSTERGGAGESKGCSEPRFDYFIPDERTFTEINDAKDATHSCGQFLCEPNQESVYFLSSSKDVETQFRNRVTLDGRSMFDGKSYTENASLDNNYDCEEVVDFRESAGACSLSLPPPPLTSPLDNASDKFRTSRDNSKKESKQSRKRPVNQCNENPERREAVKYLNKTGPRREALLKYVARDEVSDKRKKMDSLQYG* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1456 674 Pfam Ubiquitin carboxyl-terminal hydrolase 132 432 IPR001394 GO:0004843|GO:0016579
Pvu2g1456 674 SUPERFAMILY Cysteine proteinases 129 434 IPR038765 -
Pvu2g1456 674 Gene3D Cysteine proteinases 127 442 - -
Pvu2g1456 674 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 132 147 IPR018200 GO:0004843|GO:0006511
Pvu2g1456 674 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 91 461 - -
Pvu2g1456 674 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 91 461 - -
Pvu2g1456 674 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 377 395 IPR018200 GO:0004843|GO:0006511
Pvu2g1456 674 MobiDBLite consensus disorder prediction 589 645 - -
Pvu2g1456 674 MobiDBLite consensus disorder prediction 605 644 - -
Pvu2g1456 674 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 131 435 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1456 Pvu-Chr2 27580980 27585438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1456 132 434 Miscellaneous Gene Families AT2G24640 34.824 5.35e-51 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1456 K11855 - gmx:100808015 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1456 2 27580980 27585438 Pvu2g1456 2 27580980 27585438 ECH