Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1448 ATGGCAGCGAGCAACAATGTGATTGTGTGCATAAACTTCGTGGCCGTGATCCTCTCAATCCCGATCATAGGTGCCGGAATCTGGCTATCAAACGGGCAAGCAGATTCCTGCGTTCAGTTTCTGCAATGGCCCGTCATCATCCTCGGAGTTCTCATCTTGGTGGTGGCTCTCGCAGGTTGCATTGGAGCCTTTTTCAGAGTCACATGGCTCCTCGTAGTGTACCTCGTTGCCATGCTGGTGCTGGTGATACTGCTAGTGTGTCTTGTGGGGTTTGTTTACATGGTGACGCTTCGAGGTCATGGCAACATTGAAGCTGACCGGGCTTACTTGCAATATCACATGAATGACTTTTCTGGGTTCCTTCGTCGAAGGGTTAGAAGCTCCTTCAAGTGGGATCGCATCAGAAGCTGCATTGGCCAAACCAACGTGTGTGGTGAGCTCAACCAGAGTTACCGAATGGCCGAGGACTTCTTCAACGCACGTCTAACGCCCATGCAGTCAGGGTGCTGCAGGCCACCAACGCAATGTGGGTACACGTTTGTGAACCCAACCTATTGGATTAGAGCGTTCAACCTAGGAGCAGATATGGATTGCCTGCAATGGAGCAACGATCAAACACAACTTTGCTACAACTGTGACTCGTGCAAGGGCGGTTTATTGGCTAATCTTAGGAAGGAATGGAAAAGGGCCAATCTGATATTAATCATCGCTGTCATTCTTCTAATTGTGGTTTATTTGATAGGGTGCTGTGCCTTTAGGAATGCCAAAACTGAGGACCTCTTCCGCAAATACAAACAGGGGTATACTTGA 810 0.4901 MAASNNVIVCINFVAVILSIPIIGAGIWLSNGQADSCVQFLQWPVIILGVLILVVALAGCIGAFFRVTWLLVVYLVAMLVLVILLVCLVGFVYMVTLRGHGNIEADRAYLQYHMNDFSGFLRRRVRSSFKWDRIRSCIGQTNVCGELNQSYRMAEDFFNARLTPMQSGCCRPPTQCGYTFVNPTYWIRAFNLGADMDCLQWSNDQTQLCYNCDSCKGGLLANLRKEWKRANLILIIAVILLIVVYLIGCCAFRNAKTEDLFRKYKQGYT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1448 269 Pfam Tetraspanin family 6 251 IPR018499 GO:0016021
Pvu2g1448 269 PRINTS Transmembrane four family signature 6 29 - -
Pvu2g1448 269 PRINTS Transmembrane four family signature 38 64 - -
Pvu2g1448 269 PANTHER TETRASPANIN-8-RELATED 1 268 IPR044991 GO:0009734|GO:0016021
Pvu2g1448 269 ProSitePatterns Transmembrane 4 family signature. 49 71 IPR018503 GO:0016021
Pvu2g1448 269 PANTHER TETRASPANIN/PERIPHERIN-RELATED 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1448 Pvu-Chr2 27451570 27453216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1448 1 269 Miscellaneous Gene Families AT5G46700 68.030 7.64e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1448 - - gmx:100795775 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1448 2 27451570 27453216 Pvu2g1448 2 27451570 27453216 ECH
Pvu2g1448 2 27451570 27453216 Pvu3g2930 3 51074785 51076599 PCT