Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1444 ATGGCACCTTCTTTCGACACAACCACTCACACAGTTTGCGTCATGGACGCTTCTGGTCACCTCGGCTTCAGCATCGTCCAGAGACTCCTCCAAAGGGGCTACACCGTGCACGCCTCTCTCCAAAAACATGGGAAAGAAGACATGTTCAATGGGATTTCCACCGACTCTAATAAGCTCAAGCTTTTTCGATCTGACCCATTCGACTACCCTAGCATAATCGAGGCACTCCGAGGCTGCTCTGGTTTGTTCTACACGTTCGAACCTCCCCATGACCAACCAAATCATGACGAATACATGGCAGACGTGGAAGTAAGAGCTGCACACAACGTGCTGGAAGCCTGTGCCCAGACAGAGACAATAGATAAAGTGGTTTTCACTTCCTCAGCAACTGCAGTAGTTTGGAGAGAGGATCGGAAGACCATGGAACTGGATCTTGATGAGAGACATTGGAGTGATGTCAATTTCTGTCGCAAATTCAAGTTATGGCATGGTGTGTCGAAGACAATGGCTGAGAAAAGTGCGTGGGCCTTAGCAATGGACAGAGGAGTGAACATGGTGTCTATCAACGCTGGCTTATTGATGACTCATGATCTCTCCATCAAACACCCTTACCTCAGAGGAGCTGCTGAGATGTACGAGGATGGTGTTTTCGTCACCGTTGATTTACCTTTCTTGGTGGATGCCCACATCTGCGTCTACGAAGAAGTCTCATCCTACGGTCGTTATTTGTGCTTCAATCACATTATCAACACCCACGAAGACGCCGTTCAGTTAGCTCAGAAGTTGACCCCTGATGCTGCTTCTTCCTCCTCCACTTCCTCCTCCTCCTCCTCGCCGGAAAGTGGCGACCTGGGTAAGGGTTTTATCGAACAGAAAATTAGCAACAAGAAGTTGAACAAATTGATGGTGAACTTCGAAGCTTGA 924 0.4838 MAPSFDTTTHTVCVMDASGHLGFSIVQRLLQRGYTVHASLQKHGKEDMFNGISTDSNKLKLFRSDPFDYPSIIEALRGCSGLFYTFEPPHDQPNHDEYMADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKTMELDLDERHWSDVNFCRKFKLWHGVSKTMAEKSAWALAMDRGVNMVSINAGLLMTHDLSIKHPYLRGAAEMYEDGVFVTVDLPFLVDAHICVYEEVSSYGRYLCFNHIINTHEDAVQLAQKLTPDAASSSSTSSSSSSPESGDLGKGFIEQKISNKKLNKLMVNFEA* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1444 307 Gene3D - 4 307 - -
Pvu2g1444 307 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Pvu2g1444 307 CDD FR_SDR_e 12 303 - -
Pvu2g1444 307 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 306 - -
Pvu2g1444 307 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 6 306 - -
Pvu2g1444 307 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 264 IPR036291 -
Pvu2g1444 307 MobiDBLite consensus disorder prediction 266 282 - -
Pvu2g1444 307 MobiDBLite consensus disorder prediction 266 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1444 Pvu-Chr2 27421583 27424407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1444 12 279 Miscellaneous Gene Families AT1G09510 31.429 3.27e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1444 - - pvu:PHAVU_002G140100g 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1444 2 27421583 27424407 Pvu2g1444 2 27421583 27424407 ECH