LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g1440	ATGACAGAGGAAAAACCGTTCCGGGTAGGGTACGCCTTGTTGATGAAGAAGCAAAGCAGCTTTATCCAAGACTCGCTCGTGAATCTTGCAAGATCCCGAGGGATAGACCTGGTCCCGATCGACCCGAATCGGAACCTAACCGATCAAGGTCCATTCCATTGTGTCCTCCACAAGCTCTACGGCGATGATTGGAGGAATCAGCTGAACGAGTTTACGGCGAATTACCCAAATGCCGTCGTTTTAGACTCGCCGGAATCGATTGAGAGACTCCACAACCGGATTTCGATGCTGCAGGTCGTGCCGGATTTGAAAATCAACAACCAGACATGGACTGTCGGGATTCCGAAGCAGATTGTGTTGAAGTTTCCAGTGATAGCGAAGCCTCTGGTGGCTGACGGCAGCGCGAAGTCGCACAAAATGGCGCTGGTTTACAACCAAGAAGGTTTGAATTCTGTGAAGCCTCCAGTGGTGGTGCAGGAGTTCGTTAACCACGGTGGCGTGATCTTCAAGGTGTATGTGGTTGGGGAGAGCGTGAGGTGCGTGAAGCGTAAGTCGCTGCCGGACATGGGAGAGGAAGAGTTGATGAGGGTTTCAGAAGATTTATGGGCGTTTTCGCAGGTTTCGAATTTGGCAAGGGACGAAAGAATCGACGATAGGTATTATAAGAGGATGCATTTGGATAATGCTGAAATGCCTTCCCTAAACTTCCTTACTCAGATAGCTGGAGAGTTAAGACGTGTGATGAAGCTGAATCTGTTTAATTTCGATGTTATTAAGGATTCTCAACTCAAAAATCATTATCTTATTGTTGATATCAATTACTTCCCTGGGTATGCGAAAATGCCTGGTTATGAAACTGTTTTCACTGACTTTTTGTGTAATGTGTTGTGGAACAAACAACAAAGAGGTGTGTGA	915	0.4678	MTEEKPFRVGYALLMKKQSSFIQDSLVNLARSRGIDLVPIDPNRNLTDQGPFHCVLHKLYGDDWRNQLNEFTANYPNAVVLDSPESIERLHNRISMLQVVPDLKINNQTWTVGIPKQIVLKFPVIAKPLVADGSAKSHKMALVYNQEGLNSVKPPVVVQEFVNHGGVIFKVYVVGESVRCVKRKSLPDMGEEELMRVSEDLWAFSQVSNLARDERIDDRYYKRMHLDNAEMPSLNFLTQIAGELRRVMKLNLFNFDVIKDSQLKNHYLIVDINYFPGYAKMPGYETVFTDFLCNVLWNKQQRGV*	305

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g1440	304	PIRSF	ITPK	1	303	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Pvu2g1440	304	PANTHER	INOSITOL-TETRAKISPHOSPHATE 1-KINASE	1	302	-	-
	Pvu2g1440	304	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain	8	87	IPR041429	-
	Pvu2g1440	304	Gene3D	-	1	104	-	-
	Pvu2g1440	304	Gene3D	-	105	202	-	-
	Pvu2g1440	304	SUPERFAMILY	Glutathione synthetase ATP-binding domain-like	82	279	-	-
	Pvu2g1440	304	PANTHER	INOSITOL-TETRAKISPHOSPHATE 1-KINASE	1	302	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Pvu2g1440	304	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain	116	293	IPR040464	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g1440	Pvu-Chr2	27354112	27355070	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g1440	K00913		-	gmx:100794373	485.723

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu2g1440	2	27354112	27355070	Pvu2g1440	2	27354112	27355070	ECH
	Pvu2g1440	2	27354112	27355070	Pvu3g2924	3	51021811	51022836	PCT