Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1418 ATGGAAGTGAGAACTGCAAAGGCATTGGATCGGATTGCACTCAGATTGAAGAGAAAACGAGCTACCCAATATGCTGCACGTATATGCCGAGCTTTGCAGCCTTCAGGCAGGGTTGTGAAACAGAAAAAAATGGGTGAATTTAGAAAAAAGCATGCAAATGCTGGTCCTCATATTGGGCGGTCCTTGAGTAACCGCTTTTTAAGTTATAAAAAGAGTGGGAAACCGGCTCGTCTGATGTTCTATAAGAATAGCGAGTGGGTGGACTTTCCTAGGGATATTCTTGATTTTGTTAAGAAAGATCTTGAAGTCAAGAAGTCGGTTGTGGAGGTGGAGTTAAATGGGTATCATATGGTGTTAAATTTTTTCCGTATGTATATGTTGAACATGAAAACTGGTTTGCAACAACCGATTGCTTGGATTGATGAGGCAGGAGGCTGCTTTTTCCCTGAGGTCTATGCTGCTTATGATGAACAGCCTTATAATATCTGCAAACAGGACAGTGGAAAAAGTACAGAGTCATATGATTCTAATGAAATAAAATTACAATTAGAAATTGAAATAAATGGGCTGGATCAGTGCAAGTTGAGGGAGTGTACAGAGGAGTCCAATTCTTTAGTTAATGGTATTAGAATTGATACTAAACAAAAAAACTGTCCATATGATGTAGAAGTAGAAAATAGCATTAACAAAAAGGACTGTGAAAATGTTGACGAATCTATACAGCAAAATCAAGACATAGATTTAGATGCATATACTGAATCTATATATGGAAGGTTGGATTTCAATTTTGTACACAAGATATTTCTTAAGGGAATGAACAATAATGGCATTACTGATTCTGACATTGTTGGAATTGACCGGTGCTCAGGTGCGTCAATGCAAGCACGATTGGACCTATTCTTGAAGCAAGTTGATATTACCAAAAAATGTCATGGAAATGCTAATGTTCAGTATGCTTGGCTTGCTTCTACTAAAGGAGAACTGTATACAATGATGGAGTATGGGCTTGGCCACTGTAGACTATCTGCATCTAAAGGCATATATGGCACTGGTGTTCATCTTGCAGCTGTTACCTACCCTGACACCAGTGCACGTTATTGTGATGTTGACGAAAATGGGGTTCGACATTTGGTCCTTTGTCGTGTAATAATGGGGAACATGGAGATTCTCCATCCCGGCACTGGTCAGTTCCAACCCAGTAGCTGTGAATATGATAATGGGGTGGATGACATTCAATGTCCGAGATATTATGTGGTGTGGAATATGAACATGAACACCCATATCTATCCAGAATTTGTTGTTAGCTTCAAGGTGCCTTTTGATGCTGAAGCTCTTTTTTGTGGAAGTGAAAGGAAGAATACTGTTTCTGGGGTTATGACAGCCTGCCATGGACCTCAAGGACTCTTAAATTCTTGTGCAGTAGTTAAGGGAACAACTGCCGCAAGAGGTCCAACATCGCCTTGGATGCCTTTTCCTTTGCTTTTTGCTGCTATCAGAAACAAGGTTCCTCCTAATGATATGGAACTTGTCAGAAGACATTATGAACAGTTCAGGTCAAAGCAGATATCCCGGGAAGATTTTGTGAAGAATCTGAGGTTAATAGTTGGAGATGCTCTATTGAAACTTGCAGTGACCCAACTTCAATCGAAGATACCATCCAATGTTAAGAAAGGCTAA 1677 0.3989 MEVRTAKALDRIALRLKRKRATQYAARICRALQPSGRVVKQKKMGEFRKKHANAGPHIGRSLSNRFLSYKKSGKPARLMFYKNSEWVDFPRDILDFVKKDLEVKKSVVEVELNGYHMVLNFFRMYMLNMKTGLQQPIAWIDEAGGCFFPEVYAAYDEQPYNICKQDSGKSTESYDSNEIKLQLEIEINGLDQCKLRECTEESNSLVNGIRIDTKQKNCPYDVEVENSINKKDCENVDESIQQNQDIDLDAYTESIYGRLDFNFVHKIFLKGMNNNGITDSDIVGIDRCSGASMQARLDLFLKQVDITKKCHGNANVQYAWLASTKGELYTMMEYGLGHCRLSASKGIYGTGVHLAAVTYPDTSARYCDVDENGVRHLVLCRVIMGNMEILHPGTGQFQPSSCEYDNGVDDIQCPRYYVVWNMNMNTHIYPEFVVSFKVPFDAEALFCGSERKNTVSGVMTACHGPQGLLNSCAVVKGTTAARGPTSPWMPFPLLFAAIRNKVPPNDMELVRRHYEQFRSKQISREDFVKNLRLIVGDALLKLAVTQLQSKIPSNVKKG* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1418 558 Pfam RCD1-SRO-TAF4 (RST) plant domain 484 548 IPR022003 -
Pvu2g1418 558 ProSiteProfiles PARP catalytic domain profile. 234 457 IPR012317 GO:0003950
Pvu2g1418 558 Gene3D - 256 438 - -
Pvu2g1418 558 ProSiteProfiles RST domain profile. 482 553 IPR022003 -
Pvu2g1418 558 SUPERFAMILY ADP-ribosylation 260 439 - -
Pvu2g1418 558 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 1 551 IPR044964 -
Pvu2g1418 558 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 1 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1418 Pvu-Chr2 27070255 27079288 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1418 - - aprc:113869887 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1418 2 27070255 27079288 Pvu2g1418 2 27070255 27079288 ECH