Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1417 ATGGAAGCAAAAATCGTAAAGGCATTGGATAGGGTTGCACTCAATCTGAAGCGCAAGCGAGCATCCCGATATGCTGCACATTTCAGTGGAGTTTCACAACCAATTTTAGGACATTGGCCATCGTATATGTCACCGACGAGCAGGGTTGCCAAAAGGATTAGATTTGGTGGATGCAGAAACAAGCTGACAAATGCTGGTCCTCATATTGGCCATTCCTTAGTTAGGCGTTTTTCAAATTATAAAAAGAGTGGGAGACTGGAGCGTTTGATGTTCTATAGGAACGGTGAATGGTGTGACTTTCCTAAGGATGTTGTTGACTTGGTTAAGAAGGATCTTGAAGTCAAGAAGGTGTCAGTAGAGATAGAGTTAAATCGGTATCATCTTGTATTTGATTTTTTACATTTGCACAAGGTGGACCTGAAAACTGGATTGCAACAACCTATAGCTTGGATTGATGATGCAGGGCACTGCTTTTTCCCGGAAATCTATACTTCCTCCGATGAAGAACCTTATAATGTCAGCAAACAGGAAAGTGGAAAAAGTCCAGACTCATATGCGTCTAATGAAATAAAATTACATTTAGAAGTTGAAATAAATGGAGTGGATCAATCCAGACTGAGTGAGTGTAGTGGGGAGTCCAATGCTCTAGTTAAGGGTATTCAAATTGATACTAAACAAAAGTACTGTCAATATGATGTAGAAGTTGAAGATAACATTAACAAAAAGGGCTGTGGAAATGTTGGTGAAGCTATTCAGCACAATCAAGATGTAGGTTTAGATGCTTATACTGAATCAGTATATGGAATATTGGATTTGAATTCTGTACAAAAGATGTTTCTCAAGGGAATGAGTAGTTTTGGCAGTTCTGATTCAGACATAGTTGAGATTTACCACTGCTCAGGTGGGTCAATGCAAGCCCGATGGGAGCTTTTCCAGAAGCAAGCTGAAATTACAAAAAAAATTCACGGGGAAGCCAATATTAGGTATGCTTGGCTTGCTTTTTCTAAAAGAGAACTGTCTACAATGATGGAGTATGGACTTGGTCATTGTGGACTATCTGGATCAAAGTGCACATATGGCATTGGTGTTCATCTTGCAGCTGCTTCCTGCCCTGATGCCAGTGTACGTTATTGTGATGTTGACGAAAATGGGGTTCGACACTTGACCCTCTGTCGTGTAATAATGGGGAACATGGAGATTCTCTATCCTGGCACTGGTCAGTTTCAACCCAGTAGTTGTGAATATGATAGTGGGGTGGATGATATTCAGTGTCCACGATACTATGTTGTGTGGAATATGAACATGAACACCCACATCTATCCCGAATTTGTTGTTAGTTTCAAGGTTCCTTCTGATGCTGAAGGTCATTTTTGTGGACATGAGGTTAATACACCCTCTCATGGTCCTCTTGGCCTCTCAGAGTCATCCACAATAGATAATGGAAAAGCTCCTAGTATAGTTGCTAGCACTCCAAAAGTCCCGAAATCCCCTTGGATGCCTTTTCCTGTGCTTTTTGCTGCTATCAGAAATCAGGTTCAGTCCAAGGATATGAATCTTATCAAAACACATTATGAACAATTCAGGTCAAAGCAGATATCACGGGATGATTTTGTGAAGATGCTGAGGTTAATAGTTGGAGATGCTCTGTTGAGAGATACAATAACAAATCTTCAATACAAGATACCGTCCAGTGGGGGATTAGATGACTCAATCAAGAAGGAATGCTAA 1728 0.4057 MEAKIVKALDRVALNLKRKRASRYAAHFSGVSQPILGHWPSYMSPTSRVAKRIRFGGCRNKLTNAGPHIGHSLVRRFSNYKKSGRLERLMFYRNGEWCDFPKDVVDLVKKDLEVKKVSVEIELNRYHLVFDFLHLHKVDLKTGLQQPIAWIDDAGHCFFPEIYTSSDEEPYNVSKQESGKSPDSYASNEIKLHLEVEINGVDQSRLSECSGESNALVKGIQIDTKQKYCQYDVEVEDNINKKGCGNVGEAIQHNQDVGLDAYTESVYGILDLNSVQKMFLKGMSSFGSSDSDIVEIYHCSGGSMQARWELFQKQAEITKKIHGEANIRYAWLAFSKRELSTMMEYGLGHCGLSGSKCTYGIGVHLAAASCPDASVRYCDVDENGVRHLTLCRVIMGNMEILYPGTGQFQPSSCEYDSGVDDIQCPRYYVVWNMNMNTHIYPEFVVSFKVPSDAEGHFCGHEVNTPSHGPLGLSESSTIDNGKAPSIVASTPKVPKSPWMPFPVLFAAIRNQVQSKDMNLIKTHYEQFRSKQISRDDFVKMLRLIVGDALLRDTITNLQYKIPSSGGLDDSIKKEC* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1417 575 SUPERFAMILY ADP-ribosylation 273 450 - -
Pvu2g1417 575 ProSiteProfiles RST domain profile. 492 563 IPR022003 -
Pvu2g1417 575 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 1 561 IPR044964 -
Pvu2g1417 575 ProSiteProfiles PARP catalytic domain profile. 249 469 IPR012317 GO:0003950
Pvu2g1417 575 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 1 561 - -
Pvu2g1417 575 Gene3D - 270 449 - -
Pvu2g1417 575 Pfam RCD1-SRO-TAF4 (RST) plant domain 494 558 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1417 Pvu-Chr2 27061018 27067741 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1417 - - gmx:100800707 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1417 2 27061018 27067741 Pvu2g1417 2 27061018 27067741 ECH