Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1407 ATGAGCATGACCGGTTCTTCAGCTTACTATGTGGCACACGCCATCCCTCCCTTCCTCCGCCTTTCCAACAAAACTATGTTACTCCTTTCCACGCCGCCAACCACATTCTTCCCTACGTCTACAACTCCTAGGGTTACGCTTCTCTCTTCAACCTCCTCCTCCTCCTCTTCCTCCATCTCTCTGCGATCTTCTACCGCGCCCTCGCCTTCCTGCTCCTCCGTCACTCCTAAAGATAACTGCCTCGCTTCCGCCAAACATTCTCCCCCTAACATGTCCGCTTCCGTCTCTTCCCGCACCTTCCTCAACGCTCAGAGCGAACAAGACGTTTTTGCTGGAATCAAGAAAGAAGTAGAAGCTGGATCTCTGCCTGCTAATGTTGCTGCAGGAATGGAAGAAGTGTACAATAACTATAAAAAGGCAGTTATCCAAAGTGGAGATCCCAAGGCAAATGAAATTGTACTGTCAAATATGATTGCTTTATTAAATCGCGTATTTTTGGATGTGACGGATCCTTTTGTTTTTCAACCACACCACAAGGCAAAGAGAGAGCCTTTTGACTACTACGTGTTTGGTCAGAATTACATCCGTCCTTTGGTTGATTTCAAAAATGCTTATGTTGGCAACATGCCCCTTTTCATTGAAATGGAAGAGAAACTCAAGCAGGGACACAACATCATCTTAATGTCAAATCACCAAACTGAAGCTGATCCAGCCATCATTTCATTGCTTCTTGAAACACGACTTCCCTATATTGCTGAAAACCTGACCTATGTTGCAGGAGATAGAGTTATAACTGATCCTCTGTCCAAACCATTCAGTATTGGCAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCGGCACTTGTTGAGATGAAAAGAACTGCAAACATACGAGCTCTGAAGGAAATGGCTATGCTTTTAAGGAATGGATCACAGTTAGTCTGGATTGCCCCTAGTGGTGGTAGGGATCGCCCAGATGCCCAGACCAGAGAATGGGTGCCGGCACCCTTTGATATTTCTTCGGTAGATAATATGCGAAGACTTGTTGAACATTCAGGTCCACCAGGTCATGTATATCCTTTGGCAATATTGTGCCATGATATCATGCCCCCTCCACTAAAGGTTGAGAAAGAAATTGGGGAGAAAAGAATTATATGCTTTCATGGGGCTGGCATATCAGTGGCTCCAGCGATAAGCTTTTCTGAAACCACTGCTACTTGTGAAAATCCTGAAAAGGCTAAGGAGGTCTTCTCAAAAGCCCTGTACAATTCTGTGACTGAGCAATATAATGTGCTGAAATCTGCTATACAAGGAAAAAAAGGATTTGAAGCATCAACTCCTGTAGTTACTTTGTCACAGCCATGGAAGTAG 1386 0.4437 MSMTGSSAYYVAHAIPPFLRLSNKTMLLLSTPPTTFFPTSTTPRVTLLSSTSSSSSSSISLRSSTAPSPSCSSVTPKDNCLASAKHSPPNMSASVSSRTFLNAQSEQDVFAGIKKEVEAGSLPANVAAGMEEVYNNYKKAVIQSGDPKANEIVLSNMIALLNRVFLDVTDPFVFQPHHKAKREPFDYYVFGQNYIRPLVDFKNAYVGNMPLFIEMEEKLKQGHNIILMSNHQTEADPAIISLLLETRLPYIAENLTYVAGDRVITDPLSKPFSIGRNLICVYSKKHMLDDPALVEMKRTANIRALKEMAMLLRNGSQLVWIAPSGGRDRPDAQTREWVPAPFDISSVDNMRRLVEHSGPPGHVYPLAILCHDIMPPPLKVEKEIGEKRIICFHGAGISVAPAISFSETTATCENPEKAKEVFSKALYNSVTEQYNVLKSAIQGKKGFEASTPVVTLSQPWK* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1407 461 Pfam Acyltransferase 213 368 IPR002123 GO:0016746
Pvu2g1407 461 SMART plsc_2 225 371 IPR002123 GO:0016746
Pvu2g1407 461 MobiDBLite consensus disorder prediction 47 88 - -
Pvu2g1407 461 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 54 461 - -
Pvu2g1407 461 Gene3D - 95 170 IPR038114 -
Pvu2g1407 461 Gene3D - 171 452 - -
Pvu2g1407 461 PIRSF G3POAT 3 461 IPR016222 GO:0004366|GO:0006650
Pvu2g1407 461 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 54 461 IPR016222 GO:0004366|GO:0006650
Pvu2g1407 461 Pfam Glycerol-3-phosphate acyltransferase N-terminal 97 172 IPR023083 GO:0004366
Pvu2g1407 461 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 97 460 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1407 83 460 Acyl Lipid Metabolism Gene Families AT1G32200 66.667 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1407 K00630 - gmx:100789434 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1407 2 26892022 26901573 Pvu2g1407 2 26892022 26901573 ECH