Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1404 ATGGCTTCTAAATTCAAGCATGGATCCTCTATGGTTCGGAATATCACGCAGCTGAGCAATGATTTGGATCAGGAGGGTGAGAATGGGAGTGTTGGCCTTGCTACCTACACAGTTCACATTCCTCCGACGCCCGATAACCAGCCTATGGAGATTTCTCTGGAGAGGTCTAGTTCTCGGAGAGCGGAGGATCAATACGCTTCTAGTTCTTTGTTCACCGGTGGTTTTAACCAGCTCACACGTGCCCATTTGAAGGACAAGGTGATTGAGTCCGAATCCAGCCACCCCCAGATGACTGGTGCAAAAGGGTCCTCTTGCGCAGTGCCTGGGTGTGATGGAAAGGTCATGACTGACGAAAGAGGGTTGGATGTAGTCCCTTGTGAGTGCGATTACAAGATTTGTAGGGATTGTTACAGAGATGCTTTGAGGGTTGGTGAGGGGATTTGCCCTGGTTGCAAGGAGCCTTACAACGAGCCTGAGGTGAAATCACAGGCACTGCCTTTGCCTCCTAGTGCTAGGATTAATAAGATGGAGAGGAGGTTGTCGTTGATGAAATCAGGGACGTTGACGAGGAGCCAGACTAATGAGTTTGATCATGCTCAGTGGTTGTTTGAAAGCAAGGGGAGTTATGGATATGGAAATGCTATGTGGCCCAAAGAGTCTGAACCTGATGCCAGTTCTGTATCTGGTTCTGAATGGATGGGGGGCGACCCAAATGTATTCAATGAAAAGCAGTGGAAGCCCTTGACCCGGAAATTGAGTATCTCTGCTGCAATTCTCAGTCCTTATCGGCTCATTATATTTGTTCGGCTAGTGATTCTAGTTTTCTTTCTAAAGTGGAGGGTCCAAAACCCCAATGATGATGCAATCTGGCTGTGGGGCATGTCTGTGGTTTGTGAAATCTGGTTTGCCTTCTCCTGGGTGCTTGACCAGTTTCCTAAGCTCTTCCCCGTAAATCGTTTTGCTGATCTTGATGTTTTGAAAGAGAAGTTTGAGACTCCTAATCCCACCAATCCTACTGGGAAGTCTGATCTTCCGGGAGTAGATATGTTTGTGTCAACTGCTGATCCAGAAAAAGAACCACCACTTGTTACTGCCAATACCATTCTTTCTATTCTAGCTGCTGATTATCCTGTTGAGAAACTCTCATGTTATGTCTCTGATGATGGTGGTTCGCTCCTAACTTTTGAGGCCATGGCAGAGGCTGCAAGTTTTGCCAATTTGTGGGTTCCCTTTTGCCGGAAGCATGAGATTGAACCCAGGAACCCAGAATCTTATTTTAATCTCAAGAGAGACCCCTACAAGAACAAAGTGCGCTCTGACTTTGTGAGGGACCGCAGACGAGTAAAGCGTGAGTATGATGAGTTCAAGGTTCGGATTAATGGCCTTCCTGATTCAATCAGGCGGCGCTCTGATGCTTATAATGCTAGTCAAGAAATCAAAGCCATGAGGAAACATAGAGAGAATGGAAATGAAGAACCAATGGAGAATTTGAAAATTCCTAAAGCTACATGGATGGCTGATGGTACTCACTGGCCTGGCACTTGGACAAATGCTGCGCCAGAGAATTCCAGGGGTGATCATGCCAGTATCATACAGGTAATGTTAAAACCCCCAAGTGATGAACCACTGACTGGCACCGCATCAGATTCAAATGCCTTGGATTTTACTGAAGTTGATATTCGTCTTCCTATGCTTGTCTATGTTTCTCGTGAAAAACGACCCGGCTATGATCACAACAAAAAGGCTGGGGCCATGAATGCCCTAGTTCGAGCCTCAGCTATAATGTCCAATGGCCCTTTCATTCTCAATCTTGACTGTGACCATTACATATATAACTCTCAGGCCCTGAGAGAAGGAATGTGCTTCATGATGGACCGTGGTGGAGACAGGCTCTGCTATGTCCAATTTCCTCAAAGGTTTGAAGGGATAGACCCCAATGATCGCTATGCCAATCACAACACTGTCTTCTTTGATGTCAATATGCGTGCTCTTGATGGAATTCAAGGTCCTGTATATGTTGGCACAGGATGCCTATTTCGAAGAACTGCTCTCTATGGCTTTGATCCACCCCGGAACAAGGAAGAGACCGGTTGGTTTGGTAGAAAGAATAAGAAATCTTCAACAGTGGCATCGATTTCTGAAGCTGGTGCTGAGGAACAGTCATTGAGGAATAATGACATTGAGGATGAAGAAATGATGACTGCTTTTGTTCCCAAGAAATTTGGCAACTCCAGTCTTCTTGTTGATTCAATCAGGGTGGCTGAGTTCCAGGGGCTACCTCTTGCTGATCATTCATCCATCAAATATGGACGTCCACCCGGTGCTCTTACACTCCCTCGGGATCCTCTTGATGCTGCTACCGTTGCTGAGGCCATCAATGTCATCTCATGCTGGTATGAGGACAAGACTGAATGGGGCCTTAGAATTGGATGGATTTACGGGTCAGTTACTGAAGATGTTGTGACAGGTTATAGAATGCACAATAGAGGATGGAGATCTATATATTGTGTGACCAAAAGGGATGCATTCCGTGGCACTGCTCCAATCAATCTCACAGACAGGCTTCACCAGGTTCTTCGGTGGGCAACAGGCTCAGTTGAGATCTTCTTTTCACGCAACAATGCTCTGTTGGCCAGCTCTAGATTGAAATTTCTGCAGCGGATTGCTTACCTCAATGTTGGAATCTACCCTTTCACTTCCATCTTCCTTATTGTGTATTGCTTCCTTCCTGCTCTTTCACTCTTCACTGATCAGTTCATTGTTCAAAGCCTTCAAGTCAACTTCCTAGTTTACCTCTTGGGAATAACCTTGACCCTTGTCATCCTTGCTGTTTTGGAGATCAAGTGGTCTGGCATTGCGCTTGAAGAGTGGTGGAGGAATGAACAGTTCTGGTTGATTGGAGGCACTAGTGCTCATCTTGCTGCCGTGCTTCAGGGTCTGCTAAAGGTGATGGCTGGCATTGAGATTTCCTTCACTCTGACATCAAAATCTTCTGGTGATGACGAAAATGACGAATATGCTGATCTCTATGTCCTCAAGTGGACATCTCTTATGATACCACCAATCACAATCATGATGGTTAATTTGATAGCCATTGCTGTTGCAGTTAGCAGAACTATATACAGTGAGGATCGTCAATGGAGCAGTTTGCTTGGAGGTGTGTTTTTCAGCTTTTGGGTTTTGGCTCATTTGTATCCCTTTGCAAAAGGGCTAATGGGTAGAAGGGGTAGGACACCCACTATTGTGTTTGTATGGTCAGGTCTAATATCAATCACTATCTCACTCCTTTGGGTTGCTATTGACCCTCCCTCTGGTAGCAGCAGTCAAATTGGAGGGTCATTCCAATTCCCTTGA 3354 0.4574 MASKFKHGSSMVRNITQLSNDLDQEGENGSVGLATYTVHIPPTPDNQPMEISLERSSSRRAEDQYASSSLFTGGFNQLTRAHLKDKVIESESSHPQMTGAKGSSCAVPGCDGKVMTDERGLDVVPCECDYKICRDCYRDALRVGEGICPGCKEPYNEPEVKSQALPLPPSARINKMERRLSLMKSGTLTRSQTNEFDHAQWLFESKGSYGYGNAMWPKESEPDASSVSGSEWMGGDPNVFNEKQWKPLTRKLSISAAILSPYRLIIFVRLVILVFFLKWRVQNPNDDAIWLWGMSVVCEIWFAFSWVLDQFPKLFPVNRFADLDVLKEKFETPNPTNPTGKSDLPGVDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGSLLTFEAMAEAASFANLWVPFCRKHEIEPRNPESYFNLKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINGLPDSIRRRSDAYNASQEIKAMRKHRENGNEEPMENLKIPKATWMADGTHWPGTWTNAAPENSRGDHASIIQVMLKPPSDEPLTGTASDSNALDFTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSQALREGMCFMMDRGGDRLCYVQFPQRFEGIDPNDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRNKEETGWFGRKNKKSSTVASISEAGAEEQSLRNNDIEDEEMMTAFVPKKFGNSSLLVDSIRVAEFQGLPLADHSSIKYGRPPGALTLPRDPLDAATVAEAINVISCWYEDKTEWGLRIGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFTDQFIVQSLQVNFLVYLLGITLTLVILAVLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSSGDDENDEYADLYVLKWTSLMIPPITIMMVNLIAIAVAVSRTIYSEDRQWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSSQIGGSFQFP* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1404 1117 Pfam Cellulose synthase 347 1105 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu2g1404 1117 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 548 701 IPR029044 -
Pvu2g1404 1117 Pfam RING/Ubox like zinc-binding domain 107 156 - -
Pvu2g1404 1117 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 48 1115 - -
Pvu2g1404 1117 SUPERFAMILY Nucleotide-diphospho-sugar transferases 362 700 IPR029044 -
Pvu2g1404 1117 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 48 1115 - -
Pvu2g1404 1117 SUPERFAMILY RING/U-box 90 158 - -
Pvu2g1404 1117 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 166 IPR013083 -
Pvu2g1404 1117 MobiDBLite consensus disorder prediction 40 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1404 Pvu-Chr2 26843699 26848700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1404 13 1117 Glycosyltransferase AT3G03050 75.022 0.0 1740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1404 K20924 - gmx:100813900 2011.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1404 2 26843699 26848700 Pvu2g1404 2 26843699 26848700 ECH