Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1382 ATGGATCAAAATAGAGGAGAGAGCTGGAGGGAATTAGTGAAGAAGATGCTTCCTCCTGGTGCTTCCATTCCTGTTGATGCTTCTAATCTTGATTACTCAATAGCCATGGAATATGTTGGTCCACCAGTTTCATATGAATTGCCAAGAGTTGAGCCTCTTGATGGAAACTCAAGAGCAATTCCCACTGCTGAGCCACTCTCTGGATCACAGAGATCAAATACCCATGTGGGGTCTATGGTGATTGAACCAATCCCTCTGCCAGTGTCTCGTATTGCCGGTGTAACAAGTTCTCCTAATCAAAGTCCGAGGGTGTCAGGAAGCTCAGATTCTGTGGTTTCTGTCTTACAAAACCCAGATCTTTCTTCCGCTTCACCTTCGGCTTCACCTGCTTCAGTACATAATCCTCCAAGTAATCCTCCACAGCCGGTGGTTAATGAAGTGAAGAGGGCACCGGTTGTCACTTTTAATACCGTTGATAGATCTCAGAGAAAAGAGGTGGAGGTTGTGAAGCCGGTTTATTCTGAATATGTTGGAGTTTTGAAGGAAAGGAAGAAGAAGAAAATAAGAGTTTGTTATAGGTGTGGAAAAGGGAAGTGGGAAACTAAGGAGTCTTGCATAGTGTGTAATGCCAAGTATTGCAGCAACTGTGTGCTAAGGGCAATGGGATCAATGCCTGAAGGGCGCAAATGTGTAACATGCATTGGTCAACCAATTGATGAATCAAAGCGTCTGAAACTGGGTAAATATTCAAGGGTGTTGTCCCGATTGTTAAGTCCTCTAGAAGTCAAGCAAATTATGAAAGCAGAGAAAGAATGTTCTGCTAATCAGCTTCGGCCGGAGCAGCTTATCGTCAATGGGTTGCCCCTGAAGCCAGATGAGATGGCAGAACTACTTGGATGTTTGTTACCTCCACGGAAGCTGAAACCTGGTAGATATTGGTATGACAAAGAGTCTGGTCTCTGGGGAAAGGAAGGAGAAAAACCTGACAGAATCATAAGTTCAAACTTGAATTTCACTGGGAAACTTAGCCTCAATGCTAGTAATGGAAACACCGAGGTTTACATGAATGGTCGAGAGATCACAAAACTTGAACTGAGGGTACTCAGGCTGGCAAATGTGCAGTGTCCTCGTGATACACACTTTTGGGTTTATGATGATGGTCGTTATGAGGAGGAAGGTCAAAATAATATCAGAGGAAACATTTGGGAGAAGGCCTCAACAAGATTCATATGTGCCTTATTCTCTCTACCCTTTCCCCATGGTCAGCCTCATGGGCTAAAGGATGAAACTAGTCACTATACCACAGTACCTATTTATCTGGAACAGAAAAAAACTCAGAAGCTTCTTCTTCTTGGAATTCAAGGATCCGGTACTAGCACTATATTTAAGCAGGCCAAGTTTATGTATGGGAACAAGTTTTCCGCTGAGGAGCTGCAGGATGTCAAACTGATGATCCAGAGTAACATGTATAAATATCTTAGTATTTTACTTGACGGGAGGGAGCGCTTTGAAGAGGAGGCTGTTTCTAGAATGAATGAACAAGGTTCTCCTGGTCAAACTATGGAAACAAGTAGCAACGGTGAAGGTAATACTAGTGAATGCATCTATTCCCTCAACCCAAGGCTAAAACATTTCTCTGACTGGCTCCTGGACATTATAGCCACTGGGGATTTGGATGCCTTCTTCCCTGCGGCCACACGTGAATATGCACCATTAGTTGAAGAAGTATGGAAGGATCCTGCCATACAAGAAACCTTCAAAAGAAAAGATGAACTTCACTTTCTTCCAGAAGTTGCTGAGTACTTCTTAAGCCGGGCTGTGGAGATATCTAGTAATGAATACGAACCTTCTGAAAGGGACATAGTATATGCAGAAGGGGTCACTCAGGGAAATGGTTTGGCTTTCATGGAGTTTTCACTTGATGACCGTGTTCCAAAGTCGGACACTTATTCAGATAACCTTGATGCTCAGCTGCCACCACTGACCAAGTATCAACTCATAAGAGTAAATGCCAAGGGCCTTAATGAGGGCTGCAAGTGGGTTGAAATGTTTGAAGACGTTCGAGCTGTGGTCTTTTGCGTTTCCCTAAGTGACTATGATCAGTTGTGGCTTTCCCCAGACAGTAATGGCAGTGGAACACTTGTTCAAAACAAGATGGTACAAAGCAAGGAGCTTTTCGAGACCATGGTAAGACACCCTTGCTTCAAAGACACCCCTTTGGTTCTGGTCCTTAACAAGTATGATATCTTTGAGGAAAAGATTAGCAGGGTGTCCCTAGATACATGTGAATGGTTCAGTGATTTTTGTCCCGTGCGTGCACACCATAATAACCAGTCACTGGCCCATCAGGCCTACTTCTATGTTGCTATGAAATTCAAGGACCTTTATGCATCCCTCACGGGGAAAAAACTCTTTGTGGCACAAGCCAGGGCAAGGGAACGAGTAACTGTTGATGAGGCATTCAAGTACATAAAAGAGGTCCTCAAATGGGATGAAGAGAAGGAGGAAAATTTCTATGGTCCACCTGAAGATTCATTTTACAGCACAACAGACATAAGCTCCTCTCCCTTTGTCAGACAAGAGTGA 2586 0.4374 MDQNRGESWRELVKKMLPPGASIPVDASNLDYSIAMEYVGPPVSYELPRVEPLDGNSRAIPTAEPLSGSQRSNTHVGSMVIEPIPLPVSRIAGVTSSPNQSPRVSGSSDSVVSVLQNPDLSSASPSASPASVHNPPSNPPQPVVNEVKRAPVVTFNTVDRSQRKEVEVVKPVYSEYVGVLKERKKKKIRVCYRCGKGKWETKESCIVCNAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGKYSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLIVNGLPLKPDEMAELLGCLLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFTGKLSLNASNGNTEVYMNGREITKLELRVLRLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFICALFSLPFPHGQPHGLKDETSHYTTVPIYLEQKKTQKLLLLGIQGSGTSTIFKQAKFMYGNKFSAEELQDVKLMIQSNMYKYLSILLDGRERFEEEAVSRMNEQGSPGQTMETSSNGEGNTSECIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETFKRKDELHFLPEVAEYFLSRAVEISSNEYEPSERDIVYAEGVTQGNGLAFMEFSLDDRVPKSDTYSDNLDAQLPPLTKYQLIRVNAKGLNEGCKWVEMFEDVRAVVFCVSLSDYDQLWLSPDSNGSGTLVQNKMVQSKELFETMVRHPCFKDTPLVLVLNKYDIFEEKISRVSLDTCEWFSDFCPVRAHHNNQSLAHQAYFYVAMKFKDLYASLTGKKLFVAQARARERVTVDEAFKYIKEVLKWDEEKEENFYGPPEDSFYSTTDISSSPFVRQE* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1382 861 SMART galpha_1 427 817 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu2g1382 861 PRINTS Alpha G protein (transducin) signature 447 462 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu2g1382 861 PRINTS Alpha G protein (transducin) signature 614 636 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu2g1382 861 PRINTS Alpha G protein (transducin) signature 687 715 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu2g1382 861 PRINTS Alpha G protein (transducin) signature 740 749 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu2g1382 861 MobiDBLite consensus disorder prediction 843 861 - -
Pvu2g1382 861 MobiDBLite consensus disorder prediction 92 145 - -
Pvu2g1382 861 CDD G-alpha 446 831 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu2g1382 861 MobiDBLite consensus disorder prediction 837 861 - -
Pvu2g1382 861 MobiDBLite consensus disorder prediction 512 532 - -
Pvu2g1382 861 MobiDBLite consensus disorder prediction 92 131 - -
Pvu2g1382 861 SUPERFAMILY Transducin (alpha subunit), insertion domain 473 624 IPR011025 GO:0007165
Pvu2g1382 861 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 22 857 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu2g1382 861 MobiDBLite consensus disorder prediction 510 532 - -
Pvu2g1382 861 Gene3D - 475 625 IPR011025 GO:0007165
Pvu2g1382 861 ProSiteProfiles G-alpha domain profile. 444 839 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu2g1382 861 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 22 857 - -
Pvu2g1382 861 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 834 IPR027417 -
Pvu2g1382 861 SUPERFAMILY FYVE/PHD zinc finger 165 234 IPR011011 -
Pvu2g1382 861 Pfam G-protein alpha subunit 442 827 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Pvu2g1382 861 Gene3D - 642 838 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1382 Pvu-Chr2 26500371 26507500 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1382 - - gmx:100794534 1625.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1382 2 26500371 26507500 Pvu2g1382 2 26500371 26507500 ECH