Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1322 ATGGGTAATCCACGGAGATCGAAGGCCGCCGACGACCTTCATACGGCGGCAAGGTCCGGGGATCTCACCGCCGTTCAGTCAATTTTGGCTTCAAATCCTTTGGCCGTTAATTCCAGAGATAAGCATTCCAGAACACCTCTACATTTAGCGGCATTTTCTGGGCAAACAGAGGTAGTCACTTATCTCTGCAACCACAAGGCTGATGCTGGTGCTTCTGCTATGGATGACATGGCCGCAATGCACTTTGCTTCACAGAAGGGACATTTAGAAGTTGTTCGAGCTCTACTTTCAGCTGGAGCCTCTCTCAAAGCATTTACCCGCAAAGGCATGACTTCATTACACTATGCTGTTCAAGGTTCCCATCTGGAACTCGTCAAGTATTTGGCCAAGAAAGGTGCAAACCTTGGTGCCCAGACAAAGGCAGGAAAGACCCCTTTGGATCTTGCTAGCAATGAAGAAATCCGATCCTTTCTGGAGGAATTTGAGAAGTCGGCAAAGAATGGAGAATTGGGAAAGAAAGATAACGATAAAGATAAAGATAAAGCTGAAGAATTTGATCCCAAGACATCTGAATTGGGATCGGAAGGTGATTTGAATGCTGAACCTCCTGCAGCTGCTCTTGATGAAGAAAACAATGCAAGAAAAAAGAGAAAGGTTAATGAAGATGGCGCAAGAGTAGAGTCGTCACAACCAAAAAAAGCGAGAGTTAAGTTAAGCCATCTCCAAAGTTCAGATGATACCCTAGAAGAAGAGAACATGTAG 762 0.4514 MGNPRRSKAADDLHTAARSGDLTAVQSILASNPLAVNSRDKHSRTPLHLAAFSGQTEVVTYLCNHKADAGASAMDDMAAMHFASQKGHLEVVRALLSAGASLKAFTRKGMTSLHYAVQGSHLELVKYLAKKGANLGAQTKAGKTPLDLASNEEIRSFLEEFEKSAKNGELGKKDNDKDKDKAEEFDPKTSELGSEGDLNAEPPAAALDEENNARKKRKVNEDGARVESSQPKKARVKLSHLQSSDDTLEEENM* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1322 253 PANTHER ANKYRIN REPEAT PROTEIN 1 252 - -
Pvu2g1322 253 ProSiteProfiles Ankyrin repeat region circular profile. 42 68 - -
Pvu2g1322 253 ProSiteProfiles Ankyrin repeat region circular profile. 108 135 - -
Pvu2g1322 253 ProSiteProfiles Ankyrin repeat region circular profile. 75 104 - -
Pvu2g1322 253 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Pvu2g1322 253 Gene3D - 6 183 IPR036770 -
Pvu2g1322 253 Pfam Ankyrin repeats (3 copies) 80 158 IPR002110 GO:0005515
Pvu2g1322 253 Pfam Ankyrin repeats (3 copies) 13 70 IPR002110 GO:0005515
Pvu2g1322 253 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Pvu2g1322 253 PANTHER - 1 252 - -
Pvu2g1322 253 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Pvu2g1322 253 SMART ANK_2a 8 38 IPR002110 GO:0005515
Pvu2g1322 253 SMART ANK_2a 75 104 IPR002110 GO:0005515
Pvu2g1322 253 SMART ANK_2a 108 137 IPR002110 GO:0005515
Pvu2g1322 253 SMART ANK_2a 42 71 IPR002110 GO:0005515
Pvu2g1322 253 MobiDBLite consensus disorder prediction 208 247 - -
Pvu2g1322 253 MobiDBLite consensus disorder prediction 167 191 - -
Pvu2g1322 253 MobiDBLite consensus disorder prediction 167 253 - -
Pvu2g1322 253 PRINTS Ankyrin repeat signature 43 58 IPR002110 GO:0005515
Pvu2g1322 253 PRINTS Ankyrin repeat signature 124 138 IPR002110 GO:0005515
Pvu2g1322 253 SUPERFAMILY Ankyrin repeat 13 161 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1322 11 195 Miscellaneous Gene Families AT1G05640 30.222 2.15e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1322 - - gmx:100812821 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1322 2 25773650 25775716 Pvu2g1322 2 25773650 25775716 ECH