Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1289 ATGGATGCTATAAGGAAGCAAGCAAGCAAATTAAGGGAGCAAGTTGCCAGGCAACAACAGGCCATACTTAGACAGTTGGGCCAAATTAGCAATGAACCGCTCATGACTGACGAATCTGAAATTGAATGTCACCAGCAGCTTCAAAAGTTATACACTTCTACAAAGACAGCTAAGCATTTTCAGCGGCATATTGTTCGTGCTATTGAAGGGTTCATCTCTGTTAGCTCCAAGCAGATGGCGATAGCGAGGAAGTTGGCTAGGGATTGCTGTAGGTATGGAACTGAGAATCTTGGTAGTAGTTTCCCCCTTGCAAGGGCTTCTCTTCAATTTGGTAACTCTTATGATATGATGGAAAATGAGAGGGAGACTTTGCTCGGGATTTTAGGTGATCAGATCTCTGAGCCACTGCGGGCACAGATAACAGGAGCTCCTTTGGAGGATGCACGCCATCTCACTCACCGGTATGATAAACTTCATCAAGAAGTAGAAGCTCAGGCTGCTGAAGTTTTGAGGCGTCGATCGAAGTTGAGGAATTCTTCTATTTCTGCAGAGAGTTCTGTGAGGCTTCAAAATGCAGAAACAAGGTTGAAAGAACTTAAATCTGCCTTGGCGGCACTTGGTAAAGAAGCTACTGCTGCTATGTTGTCTGTTGAAGAACAACAGCAACAGATGACTCTTCAGAGCCTTCGTACAATGGTGGATGCTGAGAGAGCCTATCATCAGCATGTTCTTATTGTTCTAGAGAAAGTATATGCTGAGATAATTGAGGAGAGACAACCAAAAGAGGCTACATCATTTCCACTGCCAAGAGATGGACATAATCAACCTGCAGATGAGAATGCTGCTTCAAATGGCATTGATTATAAACAAAACAGTCAAACAGGCACATACTTTTTTGCAAAGGTCGTACATCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGCCTTTCAATTGATGATTTTGTTGTAGTTCGTCAGGTTGGTCCTAATGGATGGTCTGAAGGAGAATGCAAAGGCAATGCTGGATGGTTTCCCACTGCTTATGTACAGAGACAAGACTTGATACCTGTGAGCAAGGTAACGGAATAG 1089 0.4362 MDAIRKQASKLREQVARQQQAILRQLGQISNEPLMTDESEIECHQQLQKLYTSTKTAKHFQRHIVRAIEGFISVSSKQMAIARKLARDCCRYGTENLGSSFPLARASLQFGNSYDMMENERETLLGILGDQISEPLRAQITGAPLEDARHLTHRYDKLHQEVEAQAAEVLRRRSKLRNSSISAESSVRLQNAETRLKELKSALAALGKEATAAMLSVEEQQQQMTLQSLRTMVDAERAYHQHVLIVLEKVYAEIIEERQPKEATSFPLPRDGHNQPADENAASNGIDYKQNSQTGTYFFAKVVHPFDAQAEGELSLSIDDFVVVRQVGPNGWSEGECKGNAGWFPTAYVQRQDLIPVSKVTE* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1289 362 MobiDBLite consensus disorder prediction 262 286 - -
Pvu2g1289 362 SUPERFAMILY BAR/IMD domain-like 42 253 IPR027267 -
Pvu2g1289 362 Coils Coil 1 21 - -
Pvu2g1289 362 Coils Coil 182 209 - -
Pvu2g1289 362 Pfam Variant SH3 domain 302 350 IPR001452 GO:0005515
Pvu2g1289 362 Coils Coil 159 179 - -
Pvu2g1289 362 SMART SH3_2 298 353 IPR001452 GO:0005515
Pvu2g1289 362 Gene3D Arfaptin homology (AH) domain/BAR domain 28 257 IPR027267 -
Pvu2g1289 362 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 1 362 - -
Pvu2g1289 362 ProSiteProfiles Src homology 3 (SH3) domain profile. 295 354 IPR001452 GO:0005515
Pvu2g1289 362 PANTHER SH3 DOMAIN-CONTAINING 1 362 - -
Pvu2g1289 362 SUPERFAMILY SH3-domain 298 355 IPR036028 GO:0005515
Pvu2g1289 362 Gene3D SH3 Domains 298 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1289 Pvu-Chr2 25119600 25124375 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1289 - - gmx:100816554 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1289 2 25119600 25124375 Pvu2g1289 2 25119600 25124375 ECH