Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1275 ATGGGTTTGCCAAGGTTTGGGCGTACTAAGAACGATGGTGAGTTGAGTTCGAACCTTTACGTGGCTAATTGTGGGCCTGCAGTGGGGATTTCTGATGATGACATTGCATCTGTGTTCTGCAAATTCGGAGAGCTTAAGGGAGTTTATGCAGCAGATGAGAGTGGGACACGTGTCATAGTGGCTTATGCTGAAGAGGGCTCAGCACAAGCTGCCTTAAAGGCATTACATGGACGCCCATGTCCTGAACTTGGAGGTCGATCCATGCATATCCGTTATTCTGTGCTTCAGCCAACAACACAGGATCAAGCTACTGACTTGGTTCCTGTATCTATCACTGCATCAGAAGTGAGCATTTCAGGACTTTACCTAATTCATGACTTCATCAGTGCTAAAGAAGAAGAGGAACTGCTTCAGGCTGTTGACTGCAGGCCTTGGAACAGTCTTGCAAAAAGAAGGGTTCAACACTATGGTTATGAGTTTCGTTATGATACTAGGAACGTTAATACAAGGCACTGCTTAGGTGAACTTCCGTCGTTTGTTTCTCCAATACTTGAAAGAATTTCATCATGTCCAAGTTTCAAGAATATTAAAAATATAGTTTTGGACCAACTTACGGTAAATGAGTACCCACCTGGAGTGGGTCTGTCCCCCCATATAGACACTCATTCTGCATTTGAAGATTTAATTTTCAGCCTTTCATTATCAGGGCCCTGTATAATGGAGTTCAGACGATATGAAAATGGTGATTGGCTTCCTAAAGTTGCCTCAAGTTCTGTTGCAAAAATAGAAAATACAGAAGATCAATCAAATTTTATAAGGAGAACTATCTATCTTCCTCCTCGGTCTTTACTACTCCTGTCTGGAGAAGCACGTTATGCATGGCATCATTACATTCCACACCACAAGATAGATAAAGTTAATGGCAGTGTCATTAGAAGGGCTTCAAGAAGGGTATCTTTTACACTTCGTAAGGTTAGAGCAGGTTTGTGCAAATGTGAATTTTCTCAGTATTGCGATTCTCAGAGATAA 1029 0.4189 MGLPRFGRTKNDGELSSNLYVANCGPAVGISDDDIASVFCKFGELKGVYAADESGTRVIVAYAEEGSAQAALKALHGRPCPELGGRSMHIRYSVLQPTTQDQATDLVPVSITASEVSISGLYLIHDFISAKEEEELLQAVDCRPWNSLAKRRVQHYGYEFRYDTRNVNTRHCLGELPSFVSPILERISSCPSFKNIKNIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEFRRYENGDWLPKVASSSVAKIENTEDQSNFIRRTIYLPPRSLLLLSGEARYAWHHYIPHHKIDKVNGSVIRRASRRVSFTLRKVRAGLCKCEFSQYCDSQR* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1275 342 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 326 IPR005123 -
Pvu2g1275 342 Pfam 2OG-Fe(II) oxygenase superfamily 154 323 IPR027450 -
Pvu2g1275 342 SUPERFAMILY Clavaminate synthase-like 119 326 - -
Pvu2g1275 342 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKBH8 HOMOLOG 16 339 - -
Pvu2g1275 342 SUPERFAMILY RNA-binding domain, RBD 12 98 IPR035979 GO:0003676
Pvu2g1275 342 Gene3D - 7 108 IPR012677 -
Pvu2g1275 342 PANTHER UNCHARACTERIZED 16 339 - -
Pvu2g1275 342 Gene3D - 111 331 IPR037151 -
Pvu2g1275 342 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 95 IPR000504 GO:0003723
Pvu2g1275 342 SMART rrm1_1 18 91 IPR000504 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1275 K10770 - gmx:100777529 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1275 2 24970390 24975564 Pvu2g1275 2 24970390 24975564 ECH