Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1265 ATGGAGGAGAGAACCATAGGAAGAAATGGAAGCTCTGGAAAGGGTAGCTTCAGGTTTGGAATAGGAGTAGATGGAAAGAAGGATCATACTGTGGTAGAGCTTGGAAGTATTGACACTCACAGACTTCTTCTCAGCGTTGGAGAGAGAGACAAAAAGCAACTACCTCCCACCAACTCTCTTTCTTCCAGACAAATGAAATCCCTCTCTGCTCTCTGTGACACTATCTTACCTTCCCTCGACCACTTTCCTCACTCTTCCGATGAATCTGTCAACAGGTTCTATCGGATTTCAGCCTCCATGGCAGGCACACCACAACTTTTTGGAGGAATGATATGTGAGAAACTGAAACACCCAATGACAGGGTTACTGAAGTTGGTGTTGTGGGCGTTGTCAACGTGGTTTGGAACATTAATATTGTGTGGGATGGGGTGTGTCTCAACCAAATTCCCCTTCATCCACAGCTATCCTGATTTGTCTGTGGAGAAAAGGCAACAGATTATGCGATCATGGTCTCTCAGTTACATTCGTCACTTAAGACAGCTCTTCAGAACCATCAAACTTCTCACTCTCCTTATCTTCTTCACTCAGCTAGATGAATCAGAAGACAACCTTTCATGGAAAGCAATTGGATACTGTGGACCTGATCCAGAATTCAAAGCTCAGTTGAAGAACCACTTTTTAGAAGGAAAATCTAAGAGAGGAGAAGAGGATAAGGAAGATGAAGATGTTGAAGAGGTGATAGGACCCCTCTACAAAGGTCTTGTCCATCTGAATAACCCACGAGACATCACTGCAGATGCTCTAAGACGGATTGGATTCCCCGTATCTGTCATTCGTAGAAAGCATAAAGCTGCAGCAAACTTGTCTTCTCCTTCTTTGGTGATACAATGTGATGCTGTGGTGGTTGGTTCTGGCTCTGGGGGTGGAGTGATAGCTGGTGTTCTAGCAAAAGCTGGTTACAAAGTGTTGGTGTTGGAAAAGGGAGGGTATTTTGCTAGGAACAATCTTTCCCTTCTCGAAGGACAAACCATGGATCAAATGTACCTCAATGGTGGATTGGTTGCAAGTGATGACATGGGTATGTTCATACTATCAGGATCCACCGTTGGAGGAGGGTCAGCGATAAACTGGTCTGCCAGCATTAAAACCCCTCAGCATGTGCGCAAGGAATGGTGTGAGAAACATGGGCTAGAGTTGTTTGGAAGTGAATTGTATAGAGAAGCCTTGGATGCTGTGTGTGAGAAGATGGGAGTTCAATCTGAGATTGGAGATGAAGGATTCAACAATGCTGTCCTGAGAAAAGGGTGTCAAGAAATGGGGTATCCTGTCAATACAATTCCTAGGAATTCTTCATCAGATCATTACTGTGGCTGGTGCTGCCTGGGTTGTAAGGATGGGAAGAAGAAGGGTACCTTAGAAACATGGTTGGTGGACTTGGTGAAATCTGGAAATGGAGCAATTCTTCCGGGTTGTGAGGCAATAAAAGTCTTGCACAAGAAAAAGGAAGGGAAGGATAGAAAGGTTGCACGTGGAGTGGCTTTTGAATTTGAATATAAAGGGATTAAAGACATTTGTGTGGTGGAGTCCAAGGTCACAATTGTAGCATGTGGAGCACTCTGCACTCCAGCATTGCTTAAAAGAAGTGGCTTAAGGAATCAGAACATTGGGAGGCATTTACATCTTCATCCAGTGACAATGGCTTGGGGCTACTTCCCGGATGAACCTGCTTCTGAGGTGTGGCCAGAGGCATATAAGAAGAGCTATGAAGGAGGGATAATGACAGCAATGTCCTCGGTTGTTGCAGAGTTTGAACAGTCTGGATATGGTGCAGTGATCCAAACACCTTCATTGCATCCTGGTATGTTCTCAATTGTCACACCATGGACTTCTGGAATCGATATAAGAGATAGAATGCGAAAATTTTCTAGAACAGCTCATATATTTGCACTAGCAAGGGATAAAGGATCAGGGACTGTGGAATCACCAAAGCATATCAGTTATAGATTGGCAGGTGTAGATGAAGAGAACTTGCAGAAAGGAATTGAAAAGGTGCTGAGAATTCTGGCGGCAGCTGGAGCTGAAGAAATTGGGACACATCATAATAAGGGAAGGACCTTAAATGTTAAGCAGGTGAGCTATCATGAATTTGAGAAATTTGTTAAGGAGGAAAGTTCAAGGCCACTGGCAGACCTTTCAACACCATTGTGCTCAGCACATCAGATGGGGAGTTGCAGGATGGGTTCTAATCCAAAGCAGTCAGTGGTGAATCAGACAGGAGAAACATGGGAAATGGAAGGCCTTTATTTGGCTGATACAAGTGTCTTTCCCACAGCTTTGGGAGTCAATCCAATGGTCACTGTTCAAGCTACTGCTTATTGCATAGCACAATCTGTTGTAGAAGTTCTCAGAAGGAAAAGAAGTTAA 2424 0.441 MEERTIGRNGSSGKGSFRFGIGVDGKKDHTVVELGSIDTHRLLLSVGERDKKQLPPTNSLSSRQMKSLSALCDTILPSLDHFPHSSDESVNRFYRISASMAGTPQLFGGMICEKLKHPMTGLLKLVLWALSTWFGTLILCGMGCVSTKFPFIHSYPDLSVEKRQQIMRSWSLSYIRHLRQLFRTIKLLTLLIFFTQLDESEDNLSWKAIGYCGPDPEFKAQLKNHFLEGKSKRGEEDKEDEDVEEVIGPLYKGLVHLNNPRDITADALRRIGFPVSVIRRKHKAAANLSSPSLVIQCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGGYFARNNLSLLEGQTMDQMYLNGGLVASDDMGMFILSGSTVGGGSAINWSASIKTPQHVRKEWCEKHGLELFGSELYREALDAVCEKMGVQSEIGDEGFNNAVLRKGCQEMGYPVNTIPRNSSSDHYCGWCCLGCKDGKKKGTLETWLVDLVKSGNGAILPGCEAIKVLHKKKEGKDRKVARGVAFEFEYKGIKDICVVESKVTIVACGALCTPALLKRSGLRNQNIGRHLHLHPVTMAWGYFPDEPASEVWPEAYKKSYEGGIMTAMSSVVAEFEQSGYGAVIQTPSLHPGMFSIVTPWTSGIDIRDRMRKFSRTAHIFALARDKGSGTVESPKHISYRLAGVDEENLQKGIEKVLRILAAAGAEEIGTHHNKGRTLNVKQVSYHEFEKFVKEESSRPLADLSTPLCSAHQMGSCRMGSNPKQSVVNQTGETWEMEGLYLADTSVFPTALGVNPMVTVQATAYCIAQSVVEVLRRKRS* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1265 807 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 15 807 - -
Pvu2g1265 807 Gene3D - 720 806 IPR036188 -
Pvu2g1265 807 Gene3D - 282 603 IPR036188 -
Pvu2g1265 807 SUPERFAMILY FAD/NAD(P)-binding domain 295 799 IPR036188 -
Pvu2g1265 807 Pfam GMC oxidoreductase 298 564 IPR000172 GO:0016614|GO:0050660
Pvu2g1265 807 Pfam GMC oxidoreductase 664 793 IPR007867 GO:0016614
Pvu2g1265 807 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 15 807 - -
Pvu2g1265 807 PIRSF Lg_Ch_AO 48 807 IPR012400 GO:0046577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1265 Pvu-Chr2 24800240 24808022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1265 27 802 Acyl Lipid Metabolism Gene Families AT4G19380 57.545 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1265 K17756 - gmx:100775376 1385.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1265 2 24800240 24808022 Pvu2g1265 2 24800240 24808022 ECH
Pvu2g1265 2 24800240 24808022 Pvu3g2863 3 50355211 50363667 PCT