Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1263 ATGGCGACTGAATTTGGCGCCAACGGTCCTTCAACTCCTGCGTCCAATTCCGCGGAGTCCTTCATTGGCTGCTTCATAAGCTTGATTTCGAAGTGCGAGATTCGCTACGAGGGCGTTCTCTATTTCCTTAACGTCCAGGATTCCACCATCGGCTTGAAGAACGTTAGATCTTATGGAACGGAGGGGAGAAGAAAAGATGGCACACAAGTTCCTCCAAGCGATAAGGTTTATGAGTACATTCTTTTCCGAGGAAGTGACATTAAGAATTTGCAGATCAAGTCACCCTCCACATCTACTAAACCAGAAGAGCAGGTTTTTAGTGATGCAGCTATTATTCAGTCACAATGTTCTGGGTCCCCAAGTTCTCCTGTGGCCTCAGTTGGTGGTAGAAATTTGACAGAATCAATTCCAAGGCAAGATACCCCTGCTATATCTAGTAAACCCTTTCCTGTTGGGTTGCCTTCTTATCAACCTGTAACTGACCTGGGACCTTCAAATTCATCTGCTGCTACTCAAGTTGCTAGTCATCCATCTTTTTCTTCAGCAATGTATTGGCAAGGGCCTAGTGATATATCTAGCTGTGGTTCTCATTCCCTGCTACAATCTAGTTCCCTTTACTCCCAATCAATGACAGCATCCGAAGTTGTGCAGAATCAGATGAAAAATGCAGAAACTCAGTTACCTACAAAAGGGGGATGGACAGGTTTTTCAGAGTGTGGTTTACCTGTATCTTCTGCCATGACTTCTTCTCTTGCTAATCTGACTCATTCACATTCTCTTACCTCTTTAAAAAATTCTGATTCTCTTGATGTTCCATCTCTTTTGTCTACTAAGATACCCATGCCATATTCTGCATCCATGACTTTTGATGGATCAAACATGCCTCAGTTTTCTTCACCTTTTCAAGACATTTGTCCTGACGCAAGGCCAATTCATCCTCGACATTCTACCCCTTCATTTGTAGATTCTACTTCCCGTCCCTTGCCAAAAGCACCATCTTTGTTAACTCCAGATCAATTTGCGAATCCTAGAGAACAGTTATTATCTACTGCACATAATTTGAACCCAAATCAGAAGGGTATGGATTCTCTGACTCTAACATCCTTTGGTTCCTCGGCTTTAATGCCTTTTCCAGCATCTCAGGCACCACTTCTTCCACTGCCTACTTCAGTGCAAAAGCCTCAATACACAGCTCCACAATTCACTGAAGAGTTTGATTTTGAGGCCATGAATGAAAAGTTCAGAAAGGATGAAGTATGGGGCTCTCTTGGAAAGGCAACCACAAATATAGAGGGAGTACAGGATAATACTTCTCTCAATTTGGGTGACAGGGAATATTATGGGATGGTACCAAACCATAAGTCAGCATACAAGAAAGATGACTTTTTTGACACAATTTCATGTAACTCTTTGACCCGTGGATCAAGGAACGGACAAAATCGTTTCTCTGAGAGAATGAAACAGGATACCGAGACATTTGGCAATTTCCAGCAGAGGCATAATTTCAGTTATGGTGCTGGACGGGGTGAGAATTTCAGGGGCTCATATAATTGGGGAGGAAGGGGTTATGGCTATGGTGGGAGAGGGCGTGGTCCAAACTTTCCTCTTTAG 1611 0.432 MATEFGANGPSTPASNSAESFIGCFISLISKCEIRYEGVLYFLNVQDSTIGLKNVRSYGTEGRRKDGTQVPPSDKVYEYILFRGSDIKNLQIKSPSTSTKPEEQVFSDAAIIQSQCSGSPSSPVASVGGRNLTESIPRQDTPAISSKPFPVGLPSYQPVTDLGPSNSSAATQVASHPSFSSAMYWQGPSDISSCGSHSLLQSSSLYSQSMTASEVVQNQMKNAETQLPTKGGWTGFSECGLPVSSAMTSSLANLTHSHSLTSLKNSDSLDVPSLLSTKIPMPYSASMTFDGSNMPQFSSPFQDICPDARPIHPRHSTPSFVDSTSRPLPKAPSLLTPDQFANPREQLLSTAHNLNPNQKGMDSLTLTSFGSSALMPFPASQAPLLPLPTSVQKPQYTAPQFTEEFDFEAMNEKFRKDEVWGSLGKATTNIEGVQDNTSLNLGDREYYGMVPNHKSAYKKDDFFDTISCNSLTRGSRNGQNRFSERMKQDTETFGNFQQRHNFSYGAGRGENFRGSYNWGGRGYGYGGRGRGPNFPL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1263 536 SMART FDF_2 399 497 IPR019050 -
Pvu2g1263 536 Pfam Scd6-like Sm domain 21 94 IPR025609 -
Pvu2g1263 536 MobiDBLite consensus disorder prediction 116 142 - -
Pvu2g1263 536 ProSiteProfiles DFDF domain profile. 393 429 IPR025762 -
Pvu2g1263 536 ProSiteProfiles TFG box profile. 477 497 IPR025768 -
Pvu2g1263 536 SMART LSM14_2 15 116 IPR025609 -
Pvu2g1263 536 SUPERFAMILY Sm-like ribonucleoproteins 20 95 IPR010920 -
Pvu2g1263 536 MobiDBLite consensus disorder prediction 116 150 - -
Pvu2g1263 536 Gene3D - 12 97 - -
Pvu2g1263 536 PANTHER SCD6 PROTEIN-RELATED 16 529 - -
Pvu2g1263 536 Pfam FDF domain 400 495 IPR019050 -
Pvu2g1263 536 ProSiteProfiles FFD box profile. 455 470 IPR025761 -
Pvu2g1263 536 CDD LSm14_N 18 92 IPR025609 -
Pvu2g1263 536 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 16 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1263 Pvu-Chr2 24785346 24791950 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1263 K18749 - gmx:102669894 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1263 2 24785346 24791950 Pvu2g1263 2 24785346 24791950 ECH