Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1262 ATGGAGCAGCTGAAGACGCTTGGTAGAGAACTTGCAATGGGGTCGCACGGGCAGTCGAAGGAGTTTCTGGACCTCATCAAGTCCATCGGCGAGGCCCGATCCAAGGCCGAGGAGGACCGCATCGTCCTCCGCGAGATCGAAACCCTTAAGCGACGCATCAACGACGCCGACACGCCCAAGCGCAAGATGAAGGAGTACATCATCCGCCTCCTCTACGTCGAGATGCTAGGCCACGACGCCTCCTTCGGCTACATTCACGCCGTCAAGATGACACACGACGACGCTCTCCTCCTCAAGCGCACCGGCTACCTCGCCGTCACGCTCTTCCTCAGCGACGATCACGACCTCATCATCCTCATCGTTAACACCATCCAGAAGGATCTCGCCTCCGATAACTACCTCGTCGTCTGCGCCGCCCTTAACGCCGTCTGCCGCCTCATCAACGAGGAGACCATCCCCGCCGTCCTCCCCCGCGTCGTCGACCTCCTTAACCACTCCAAGGACGCCGTCCGGAAGAAGGCCGTTATGGCGCTCCATCGCTTCTACCAGAAATCTCCCTCCTCCGTCTCCCACCTGTTGTCCAATTTTCGCAAGCGCTTGTGCGATAACGATCCTGGAGTCATGGGCGCTTCTCTTTGCCCTCTCTTTAATCTCGTCTCCGACGATGCTAATTCTTACAAGGATCTCGTCGTTAGTTTCGTCAACATTCTTAAACAGGTCGCAGAACACCGGTTGCCCAAGACTTATGATTATCACCAAATGCCTGCACCCTTCATTCAGATTAAGATGCTGAAAATTCTGGCATTGTTGGGAAGTGGTGACAAGCAGGCTAGTGGACACATGTACACCGTGCTTGGTGATATAATTAGGAAGAGTGATTCTATGACCAACATAGGGAATGCTGTTCTCTATGAGTGCATATGCTGTGTTGCTTCTATATATCCCAACTCTAAGTTATTAGAGGCTGCAGCGGATGTGATAGCTAAATTTTTAAAGAGTGACAGTCATAATCTCAAGTACATGGGCATTGATGCCCTTGGTCGGTTGATAAAGTTAAGTCCACATATTGCAGAACAACATCAACTGGCCGTCATTGACTGCTTAGAGGACCCTGATGATAGTCTGAAACGGAAAACTTTCGAACTGTTATACAAAATGACCAAGTCCTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATAAGTGATGACCACTATAAAACCTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCGCCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATATTAAGGTGGCAGATAATTTAATGCGGTTGATTGCTGAAGGATTTGGGGAGGACGATGATGCTGCAGACAGTCAATTGAGATCATCTGCTGTCGAATCATATTTGCGCATTATTGGAGAGCCCAAGCTTCCTTCTGTGTTTCTCCAACTCATCTGTTGGGTTCTGGGGGAATATGGAACAGCTGATGGAAAGTATTCTGCTTCATACATCAGTGGGAAGTTATGTGACATTGCAGAGGCATATTCTAATGATGAAAATGTTAAGGCTTATGCAATTTCAGCGTTGATGAAAATTTATGCGTTTGAAGTGGCAGCTAGGAGGAAAGTGGATATCCTACCTGAGTGTCAATCTTTGATTGAAGATTTATTGGCATCCAATTCTACAGATTTGCAGCAACGTGCCTATGAATTGCAAGCCCTTATAGGTCTGGGAGCAGAAGCTGTTGAAACAATAATGCCAAGAGATGCAAGTTGTGAAGACATTGAGGTTGACAAGAATCTTTCTTTCCTCAATGAGTATGTTCAGCAATCTCTAGAAAGGGGTGCTCGATCCTATATTCCCGAGGATGAGCGCACTGGAATGGGGAATATGAACAATTTCAGAAGCCAGGATCATAATGAATCTTTGCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCAAAGGCTCCAATGCAACCAAAAGCTGCTCCAGTTTCATTTGCATCCTCATCCGACATTGTTCCAGTACCAGAGGCACTTTCTTCCAGGGAAACTCACCATATTTCATCAGTGGGATCAATATCAGAGGCTGGATCGTCAGAGCTTAAGCTAAGGCTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCTACTTATTCGTCTTCAGCATCATCTGCCTCTGATTCTTATTCTACATCCCAAAAGCCAACAAATGGGGCAACACAGGTGGATGGTGCTACAGCTGTTAATTCAAAAGTACGCGATAGTTATGATTCAAGAAAGACGCAGGTTGATATTACTCCAGAAAAGCAGAAGCTTGCTGCTTCATTGTTTGGTGGTTCAACTAAACCTGAGAAAAGATCATCTACAAGCCATAAGGTTCCAAAATCTAATGCTGCAGACGGAGCTCAGGGATCAAAGGCTGCTGTTGTACCCAATGAAGTAGCTGTGGAAAAAACAATTCATCAACCCCCTCCTCCTGATTTGCTTGACTTGGGTGAATCAGCTGTCACTACAGCTCCTTCCTCTGTGGATCCGTTCCAGCAATTAGAAGGACTTTATGACCCAAGCATTAGTTCTGGAATAGCTGATAATGTAGGTGCTACTACAAATGCCACTGATATTATGGGATTGTATTCGGAGAGTACTGGCAGTGGTAGCTATTCTATACCTGTAAGTGGGAATAATGCAAATCTTTTATCTGAATTGTCAAATGCACCTGTAAAAGCTACTAGTGGAGAAACAATTACGACGCCTTTGCCCCAATCTATTAAGGGTCCAAATGCTAAAGATTCTTTGGATAAGGATGCACTAGTGAGGCAGATGGGTGTGAATCCCTCAAGTCAGAATCCCAACTTGTTCAGTGACTTGCTTGGCTAA 2925 0.4578 MEQLKTLGRELAMGSHGQSKEFLDLIKSIGEARSKAEEDRIVLREIETLKRRINDADTPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDALLLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLASDNYLVVCAALNAVCRLINEETIPAVLPRVVDLLNHSKDAVRKKAVMALHRFYQKSPSSVSHLLSNFRKRLCDNDPGVMGASLCPLFNLVSDDANSYKDLVVSFVNILKQVAEHRLPKTYDYHQMPAPFIQIKMLKILALLGSGDKQASGHMYTVLGDIIRKSDSMTNIGNAVLYECICCVASIYPNSKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPHIAEQHQLAVIDCLEDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVADNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQLICWVLGEYGTADGKYSASYISGKLCDIAEAYSNDENVKAYAISALMKIYAFEVAARRKVDILPECQSLIEDLLASNSTDLQQRAYELQALIGLGAEAVETIMPRDASCEDIEVDKNLSFLNEYVQQSLERGARSYIPEDERTGMGNMNNFRSQDHNESLQHGLRFEAYEVPKAPMQPKAAPVSFASSSDIVPVPEALSSRETHHISSVGSISEAGSSELKLRLDGVQKKWGRPTYSSSASSASDSYSTSQKPTNGATQVDGATAVNSKVRDSYDSRKTQVDITPEKQKLAASLFGGSTKPEKRSSTSHKVPKSNAADGAQGSKAAVVPNEVAVEKTIHQPPPPDLLDLGESAVTTAPSSVDPFQQLEGLYDPSISSGIADNVGATTNATDIMGLYSESTGSGSYSIPVSGNNANLLSELSNAPVKATSGETITTPLPQSIKGPNAKDSLDKDALVRQMGVNPSSQNPNLFSDLLG* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1262 974 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 12 970 - -
Pvu2g1262 974 Pfam Adaptin N terminal region 46 591 IPR002553 GO:0006886|GO:0016192|GO:0030117
Pvu2g1262 974 Gene3D - 9 603 IPR011989 -
Pvu2g1262 974 SUPERFAMILY ARM repeat 19 596 IPR016024 -
Pvu2g1262 974 MobiDBLite consensus disorder prediction 730 768 - -
Pvu2g1262 974 PIRSF AP4_epsilon 10 823 IPR017109 GO:0015031|GO:0030124
Pvu2g1262 974 PIRSF AP4_epsilon 907 974 IPR017109 GO:0015031|GO:0030124
Pvu2g1262 974 MobiDBLite consensus disorder prediction 729 822 - -
Pvu2g1262 974 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 12 970 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1262 Pvu-Chr2 24741648 24754404 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1262 K12400 - gmx:100819573 1720.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1262 2 24741648 24754404 Pvu2g1262 2 24741648 24754404 ECH