Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1252 ATGGAGGGGGAAGAAGGAGGAGGCATAAGGTTGAGCAAGCGAATCGCGAACGGAGAAGTTGACTACAAGACCAAATCCGGCACTGCCTGGAGCCACTCCTATCTCAACCAGAAGCCATGGCATCCTCTCTCTTATCCCAACCAACGCCGCAAGTGGATCGCCGAACAAACCCACGCCAATCGCCAACGCCGCACCGAAGAGGTTTCTCGCGAGTTCGCGCAGGAGCAGGAGTTCTTTCGCCAAACTAATCTTATCTCCAAGAAGGAGAAGGAAAAGGTGGAGCTCATGCAAGCTGTTAGTTTCATGTACGTTCGTCCTCCGGGTTACAACGCCGAAAGCGCCAAAGCTGCGGAAATGAATGATGAGAAGAAACAAGAGGACATGAACAAGGGACCTCAACACGATGATGCTCGTGATGGACCTTCCTCTTCCATACCACAGAGTACGGATTTGAATGAAGCGAAGAAAAAACCGAGGCCCAAGGATGTTTTTGGGCGGCCTCTTCCGACAGAAGAAGAATTTGAAGTTCTTAAAAATGCACCAAGACTGGAAACAGGAGTTCCTGCCAGGGTGAAACCTTTTGCAGTTGAAGTACGCAATGTAAAATGTTTAAGATGTGGGAACTACGGTCACCAAAGTGGCGATCGTGAATGTCCCTTGAAGGATATTATAATGCCTAGTGAGGAAAGCAGATTGAAAAGAGACGATCCCTTGAATGCCATCCTTGCTCACACAGATCCTACTGAGCCCCTAAAATGGGAGCTCAAGCAGAGGCCGGGAATCAGTCCTCCTCGTGGAGGTTTCAAACCAGATGATCCCAACCAGCAGATAGTTGCCGAGGACATATTTGATGAGTATGGAGGTTTTCTTGGTATGGATAGTATACCTGAGTTATTAACCAACTTTTCTAAGAAACCAAAGAAGTCCAAAAGGAGCAAGCACAAAAGGCAGCAACAAATAAATTCAGATAGTGAAGCATCATCTGAGGATGGAGAGAGGAGGCGTAAGAAAAAAAAGGTTAAGGTAAACAAAAAGATGCAAGGTCATGCAAGGTCTAGTTCATCCGAAACTTCAGTCTCTGAAGGTCACAGAAGGAGCAGATACAAGAGTCTGCATTCGTCCGAAGATTCTGACAGTTACAGGAATTGTCAAAGTAAGTCTAAACATGAGCGTTCCTTTTTGTCTAAAGGTTCTGACCGTCCTAGACACAGTAGGAGTAAACATGGCAGAAGAAAGCATCCTTATTCATCTGAAGATTCCGACAATCAGAGGGATGATCAAAGTAGAAAGAATGTACAAAAGCATGAGAGGAAAGATACCAAAAAAAGTAAAGATGACAGAAGAAGGCATCCTTATTCATCTGAAGATTCTGACAGTCAGAGGGCTGATCGAAGTAGAAAGAATGTACCAAAGCATGAGAGGAAAGATACCAAAAGAAGACGTTCATATTCGGATGAGGATTCTGGTCCTGCATGTGATCATGCTGATAACATGAGCAGGGATGTGATTTCTTATTCATCTGATTCTAATCAACAAAGACAATCCAAGTTTAAAAGGAGCAGCCATAAGCACTCATCAACCACCTATTCTGATTCGCAAAAACATCACAATTTTTTTGGTTTTGATCGCTACCAAGGAAATCAGAACAGCGGAGCTGTACATTCTTATTCACCTGAAGATTCTAATGTGGACAGAGACGATCAAAATAGAAGAATCAAACAAAGGTATACTCCTAAGTGTTCTAAACATCCCGAGAATGATATGGATAAACAGAATGGAAAAAAGCAGTATTCTTTGAAGGATTCTAGTGCCGATGGATATCATAGAAGTAAAACAGGTAGATATGAGCGTTCTTATTCATCCGATTATGCTGATCATCGTGAGAAACATCACGAGTCAAGAAGGAGGAACTCCAAGCGATGA 1923 0.4358 MEGEEGGGIRLSKRIANGEVDYKTKSGTAWSHSYLNQKPWHPLSYPNQRRKWIAEQTHANRQRRTEEVSREFAQEQEFFRQTNLISKKEKEKVELMQAVSFMYVRPPGYNAESAKAAEMNDEKKQEDMNKGPQHDDARDGPSSSIPQSTDLNEAKKKPRPKDVFGRPLPTEEEFEVLKNAPRLETGVPARVKPFAVEVRNVKCLRCGNYGHQSGDRECPLKDIIMPSEESRLKRDDPLNAILAHTDPTEPLKWELKQRPGISPPRGGFKPDDPNQQIVAEDIFDEYGGFLGMDSIPELLTNFSKKPKKSKRSKHKRQQQINSDSEASSEDGERRRKKKKVKVNKKMQGHARSSSSETSVSEGHRRSRYKSLHSSEDSDSYRNCQSKSKHERSFLSKGSDRPRHSRSKHGRRKHPYSSEDSDNQRDDQSRKNVQKHERKDTKKSKDDRRRHPYSSEDSDSQRADRSRKNVPKHERKDTKRRRSYSDEDSGPACDHADNMSRDVISYSSDSNQQRQSKFKRSSHKHSSTTYSDSQKHHNFFGFDRYQGNQNSGAVHSYSPEDSNVDRDDQNRRIKQRYTPKCSKHPENDMDKQNGKKQYSLKDSSADGYHRSKTGRYERSYSSDYADHREKHHESRRRNSKR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1252 640 MobiDBLite consensus disorder prediction 316 336 - -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 256 276 - -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 152 168 - -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 478 494 - -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 116 137 - -
Pvu2g1252 640 Pfam N-terminal domain of CBF1 interacting co-repressor CIR 40 75 IPR019339 -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 559 631 - -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 412 470 - -
Pvu2g1252 640 PANTHER CBF1 INTERACTING COREPRESSOR CIR 10 487 IPR040014 GO:0003714
Pvu2g1252 640 SMART Cir_N_3 39 75 IPR019339 -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 113 168 - -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 542 557 - -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 500 514 - -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 301 640 - -
Pvu2g1252 640 MobiDBLite consensus disorder prediction 358 400 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1252 K06066 - gmx:100788280 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1252 2 24586496 24590945 Pvu2g1252 2 24586496 24590945 ECH