Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1245 ATGGTTCCTAAACCCATCACAGTGACAGTAGGAGCACCACCGGTGTCTTCTCCACCCAACCCTCTCTTGAAAAACGCAGTATCAACCGTTAAAACAGAAGAAAAACCCCAAACCACCACACTCCCCCCACTCTCAACCACCACTCCAAAAACCAACCCTGCTCCAACCATCAAAACAACGCCGCAGCAACGCCTGGAACCAAAAAGAAAAACGAATTCATGGGCTCCAGCGCTAATGCTGAACGCGTTGGACAGCATCGTCAACAACTTCATAGACCCTCCACTGAAACCCTCCGTAGACCCCAGACACGTCCTGTCGCAAAACTTCGCCCCCGTCAATGAACTCCCTCCCACCGAGTGCCAAGTAATCGAGGGCTCCCTCCCGCCCTGCCTCGACGGCGCCTACATCCGAAATGGCCCCAACCCTCAGTTCCTCCCGCGTGGACCCTACCACCTCTTCGACGGAGACGGCATGCTCCACGCGCTCCGCATCTTCCAAGGCAAACCCACCCTATGTAGCCGCTACGTCAAAACCTACAAATACACAATGGAAAACGACGCTGGTTTCCCTCTCATCCCCAACGTCTTCTCTGGCTTCAACTCCCTTGCTGGCTCCGCGGCGCGTGGCTCTCTAACCGCGGCGAGGATCGCCACGGGACAGTTCAATCCGTCTAATGGCATTGGGTTGGCCAACACCAGCTTAGCCTTCTTCGCTAACCGTCTCTTCGCGCTGGGCGAATCCGACCTCCCCTACGCCGTCTATGTTACCCCTAACGGCGAGGTCGAAACAATCGGCCGTTACGACTTCAACGGCAAACTTTCGGTCAGCATGACGGCGCATCCGAAGGTAGACCCCGACACAGGGGAATGCTTCGCCTTCCGTTACGGCCCCGTTCCCCCGTTCCTAACCTACTTCCGTTTTGACCCTAACGGGAACAAGCACGACGACGTGCCTATCTTCTCCGTGACTTCACCTTCGTTTCTCCACGACTTCGCCATCACCAAGAATTATGCAGTCTTCTGCGATATTCAGCTCGGAATGAACCCTCTCGGCATGATCGCCGGTGGCTCCCCCATGGGCTCCATCGCTTCCAAAGTCCCAAGGATTGGAGTCCTTCCTCGTTATGCTAAGGATGAATCCATGATGAAGTGGTTCGAGGTGCCGGGGTTTAACTTCATTCACGCGATAAACGCGTGGGAGGAGGATGAGGGAAGAACATTGGTGGTGGTGGCGCCGAATATTCTGTCGTTGGAGCACGCAATAGAGAGAGTGGAGCTGGTTCACGCGATGGTGGAGAAGCTGAGGATCGATCTGGAGACGGGAATTGTGACGCGGCAACCGGTGTCGGCGCGGAACCTTGATTTCGCGGTTATAAACCCAGCATTCGTTGGGAAGAAGAATAGGTTCGTTTACGCGGCGGTGGGAGACCCGATGCCGAAGATCTCGGGGGTGGTGAAGCTGGACGTGTCGAAGGTGGAGGAGCGGGGGGAGTGCACGGTGGGATGCAGGATGTACGGCGAGGGATGCTACGGCGGGGAACCGTTCTTCGTGGCGAAGGAGGAAGGGGGCGAGGAGGACGATGGGTACTTGGTGACCTACGTGCACGACGAGAGGAAGGGAGAGTCGAAGTTCTTGGTGATGGACACGAAGTCGCCGGAGCTGGACGTGGTGGCGGTGGTGAGGCTTCCACGGCGGGTTCCGTACGGTTTTCATGGGTATTTTGTGAAGGAAAGTGACCTTAGGAAGGCGGTGTTGTTGTGA 1761 0.5645 MVPKPITVTVGAPPVSSPPNPLLKNAVSTVKTEEKPQTTTLPPLSTTTPKTNPAPTIKTTPQQRLEPKRKTNSWAPALMLNALDSIVNNFIDPPLKPSVDPRHVLSQNFAPVNELPPTECQVIEGSLPPCLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRIFQGKPTLCSRYVKTYKYTMENDAGFPLIPNVFSGFNSLAGSAARGSLTAARIATGQFNPSNGIGLANTSLAFFANRLFALGESDLPYAVYVTPNGEVETIGRYDFNGKLSVSMTAHPKVDPDTGECFAFRYGPVPPFLTYFRFDPNGNKHDDVPIFSVTSPSFLHDFAITKNYAVFCDIQLGMNPLGMIAGGSPMGSIASKVPRIGVLPRYAKDESMMKWFEVPGFNFIHAINAWEEDEGRTLVVVAPNILSLEHAIERVELVHAMVEKLRIDLETGIVTRQPVSARNLDFAVINPAFVGKKNRFVYAAVGDPMPKISGVVKLDVSKVEERGECTVGCRMYGEGCYGGEPFFVAKEEGGEEDDGYLVTYVHDERKGESKFLVMDTKSPELDVVAVVRLPRRVPYGFHGYFVKESDLRKAVLL* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1245 586 PANTHER BETA-CAROTENE DIOXYGENASE 24 582 IPR004294 GO:0016702
Pvu2g1245 586 MobiDBLite consensus disorder prediction 1 70 - -
Pvu2g1245 586 MobiDBLite consensus disorder prediction 21 69 - -
Pvu2g1245 586 Pfam Retinal pigment epithelial membrane protein 111 575 IPR004294 GO:0016702
Pvu2g1245 586 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 24 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1245 Pvu-Chr2 24398916 24401466 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1245 K09840 - gmx:100777875 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1245 2 24398916 24401466 Pvu2g1245 2 24398916 24401466 ECH