Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1232 ATGGCACTTATGGAGCTTTTGTGGGTGGCATCTATGCCAGTGATCAAAGTACTACTAATCACTGCAGTTGGCTTAGTTCTTGCACTGGGTAACATAAATTTATTGGGAAAAGATGCAAGGATACAAGTGAACAATCTTGTACATTACGTGCTTTATCCTGCTCTGGTGGGTGGCAATTTGGCTGACACGATTACTTCTGAGAATGTTGTTTCATTGTGGTTCATGCCCGTCAATATCCTCCTCACGTTTATCATAGGCTCTGCCTTAGGATGGATCCTTGTCAAATTAACAAGGGCTCCCAAACATTTGGAGGGACTAATAGTTGGTGTCTGTTCTGCAGGAAATTTAGGAAACTTGCCTATAATCATTATCCCGGCTATATGTAAAGACAAAGGTAGTCCTTTTGGAGACTCCAATGTCTGCTATCAATATGGAATGGCTTATGCTTCACTTTCTATGGCGGTTGGAGCTGTTTACATATGGATTTATGTATACAACATAATGCGAATTTCCGCAAGTATAGTTCCCAAAGAAGAGTATAGAACTAGCTCCTTCACACAGGAGGCTTCAGGAGAGATACAAGATTTCCTCTCTGAGGAAGAAGACCCCAAAAAGGACAACATGGATGATGATGCATACACCCTTTTGCTTTCTTCAAATGAATCCGAGGAGAAAGTGAAGGTATCAATCTCAGCTAAAATCAAAGACCTATTAGGAAAGCTTTTAGTCAACTCCAATTTCAAAGCTGTATTTTCACCAACAACTCTTGGATCGATTGTTGGCTTTATGGTTGGGGTGGTTCCTCTGATACGTAAACTGATGATTGGCAGTGATGCACCACTTCATGTGATTCAAGACTCTGTTACTATGTTGGGTGAAGCTGCAATCCCAGTCATAACTCTTATAATGGGAGCAAACCTCCTTAAAGGCTTGAAGGGAGCAAACACTTCATTTTGTACAATCATTGGAATATTAGTAGTTCGATATATCATTCTGCCAATTTTGGGTATTCTAGTTATTAAAGGAGCAACTGAATTGGGTTTGGTGCAACCAGATCCCTTGTATCAGTTTGTGCTTCTCCTTGAATATGCACTTCCTCCAGCAATGGCTATAGGTACCATTGCCCAGTTGTTTGGAGCAGGTGAAGGTGAATGTTCTGTTATCATGCTATGGACATATGTTTTGGCGTCAGTTGCAGTCACTTTATGGTCAACCTACTTCATGTGGCTTGTGGCTTAA 1239 0.41 MALMELLWVASMPVIKVLLITAVGLVLALGNINLLGKDARIQVNNLVHYVLYPALVGGNLADTITSENVVSLWFMPVNILLTFIIGSALGWILVKLTRAPKHLEGLIVGVCSAGNLGNLPIIIIPAICKDKGSPFGDSNVCYQYGMAYASLSMAVGAVYIWIYVYNIMRISASIVPKEEYRTSSFTQEASGEIQDFLSEEEDPKKDNMDDDAYTLLLSSNESEEKVKVSISAKIKDLLGKLLVNSNFKAVFSPTTLGSIVGFMVGVVPLIRKLMIGSDAPLHVIQDSVTMLGEAAIPVITLIMGANLLKGLKGANTSFCTIIGILVVRYIILPILGILVIKGATELGLVQPDPLYQFVLLLEYALPPAMAIGTIAQLFGAGEGECSVIMLWTYVLASVAVTLWSTYFMWLVA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1232 412 PANTHER - 1 412 IPR045033 GO:0080162
Pvu2g1232 412 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 412 - -
Pvu2g1232 412 Pfam Membrane transport protein 10 403 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1232 Pvu-Chr2 24190929 24194977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1232 K24139 - gmx:100785182 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1232 2 24190929 24194977 Pvu2g1232 2 24190929 24194977 ECH
Pvu2g1232 2 24190929 24194977 Pvu3g2802 3 49839908 49843671 PCT