Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1227 ATGGTCATGTCCCTTGTTCTGAAGAAAGATAAAAAAGTGATATGCACCACGAGGTGCCTAGACCCGCCGATTGAATTGCCACAGGAATTGAGCTTAACATGTGAAATTTCAAAAAACAAGACATATAGTCTTTCTAAATTTCCCCAATTTTCACTAATTCCGGATCCATATAATTTACACGAGAAGTCTGAGTGGGGAAAGTTTTTGAATTACCTATGTAAATATGAGAAGGTTGCCCTTATAAACTTTGAGCAGTACAAGTTTTACATTCTACCTCCTGCATTAGCTTCAACATCTAGCCCAGTCAATGTTGCATATAATATAGATAATACTGGTTCTGTAGATACTCGTCCAAGGGATTGTGAATCAGGTTCACACTTAGAGGAATGTGGTGGGACAAATACAGTTGAAGATCATAAGTGTTCTCGAGCTGAAGAAACTTGCAATGAGTTTCAATCTCAAGTGCCTCCAAAAAATTTCATACGCGCAGACCCAAGTTACCTTAAAACTCTTGGCCAAGCTCATTCTGGATGGATTTTTGGTGGAATAGCTGAGCTTGTTGATAATTCCAAGGATGCCAAAGCAACTAAAATGGACATTTTTGTAGATATCATCCCGTTGAAGAAATCTGGGAAGGATGTCCCAATGCTGTCTCTTATTGATGACGGTCAAGGGATGAACCATGATGAGGTTATGAAAATGGTATCTTTTGGACATAAGCAATCTGATAAAGTTGACAAGGATCACATTGGCAAATTTGGTGTTGGTTTCAAAACAGGAGCAATGAGACTTGGGAGAGATGTTCTGGTTCTAACACAAACAACTAATTCCAGATCACTAGCTTTTCTTTCACAATCATTGAATGAAGGCAAAGATAATATTGAAATTCCCGTAGTTAGCTATTGTCGACAAGGACAACGTATGGAGGTTGACCTAAGCATGCAGTCTGAAGCTTTGGCAAAATACAATTTGAAAGCTATCAAGAATTTTTCACCATTTAACAAGTATCTTATTGGTGAAAAGGCAGCCTTGTTTGGTACCGGTACAGGAACACAAATATACATATGGAACTTGGATGAATGGGGATCAAAGTATTGTTTAGAATGGCATGATGGATTGAAAGGTGGGAGTTCTTTTCACCAAGGTGACATTGTTATCCGCAGCAAAAGGACTCGTTCTCGTCAAGGGCAGATTAGTCAAAAGGTTCCATTGGATTACTCACTACGAGCTTATTTAGAAATTATATTTTTAGTTCCTCGAATGAAGATAAGTGTACAAAGAACATTGGTTAAAAGTCGACCATTATCAAAATTCCTTACTCAAACTGTTATTGAAACTGGTGACATATTAGGAAGGCCAGTTGAATTAATCCTTGGATTTAGTCAATTAGAGTGGGAGCGGGCAAATTGTGGAATGTTTTTGTATTGGCATGGTCGCCTAATTGAGGCTTACAAGAGAGTTGGTGGAATGGCTCATAGTGCAGATGTTGGCCGGGGTGTAATTGGTGTTGTAGATTTGACCACTTTAATGGATGATGAAGATGGTCGGGTGTGGGTACATAATAACAAGCAGGGATTCCAAGACTCAGAACAATATGCATGTCTTGAGCAGTGGCTGGGTAGAAAAGCAGATGAATACTGGGACATCAATTTTGATGCACTTAAGTTGAACAAAGAAAATTGTGTCTTCAAACCTGATCATGAGTGGGTTCAATGTGACAAGTGCAGAAAGTGGAGAATTTTACCTACAGATTTTGATAGCAGAAAATTGCCTTTGCAATGGTTTTGTTTTATGGAGCCTTTCAAAGGTCAATGTGCATATTCTGAACAGAAGATGGCGCCGGGCATAGTTAATGTTTCCACAAAGAGGTCGGGTTATGCTTGCTTGTTGAAGGATTCCAGTGATGAAAAGGTAGAAGGTGTTATGAAAACCTCTGGCACAGATGATAAATTAATCAATCATGAGAATACCAAATTTCCAGCATTAAAGCGGTTGAGAAAGGGGCAGTTGAAAAATTAA 2019 0.3878 MVMSLVLKKDKKVICTTRCLDPPIELPQELSLTCEISKNKTYSLSKFPQFSLIPDPYNLHEKSEWGKFLNYLCKYEKVALINFEQYKFYILPPALASTSSPVNVAYNIDNTGSVDTRPRDCESGSHLEECGGTNTVEDHKCSRAEETCNEFQSQVPPKNFIRADPSYLKTLGQAHSGWIFGGIAELVDNSKDAKATKMDIFVDIIPLKKSGKDVPMLSLIDDGQGMNHDEVMKMVSFGHKQSDKVDKDHIGKFGVGFKTGAMRLGRDVLVLTQTTNSRSLAFLSQSLNEGKDNIEIPVVSYCRQGQRMEVDLSMQSEALAKYNLKAIKNFSPFNKYLIGEKAALFGTGTGTQIYIWNLDEWGSKYCLEWHDGLKGGSSFHQGDIVIRSKRTRSRQGQISQKVPLDYSLRAYLEIIFLVPRMKISVQRTLVKSRPLSKFLTQTVIETGDILGRPVELILGFSQLEWERANCGMFLYWHGRLIEAYKRVGGMAHSADVGRGVIGVVDLTTLMDDEDGRVWVHNNKQGFQDSEQYACLEQWLGRKADEYWDINFDALKLNKENCVFKPDHEWVQCDKCRKWRILPTDFDSRKLPLQWFCFMEPFKGQCAYSEQKMAPGIVNVSTKRSGYACLLKDSSDEKVEGVMKTSGTDDKLINHENTKFPALKRLRKGQLKN* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1227 672 Gene3D - 142 336 IPR036890 -
Pvu2g1227 672 PANTHER OS06G0622000 PROTEIN 4 669 - -
Pvu2g1227 672 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 4 669 IPR045261 GO:0016887
Pvu2g1227 672 CDD HATPase_MORC-like 167 288 - -
Pvu2g1227 672 ProSiteProfiles Zinc finger CW-type profile. 563 613 IPR011124 GO:0008270
Pvu2g1227 672 Gene3D - 555 613 - -
Pvu2g1227 672 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 171 339 IPR036890 -
Pvu2g1227 672 Pfam CW-type Zinc Finger 568 610 IPR011124 GO:0008270
Pvu2g1227 672 Pfam Morc6 ribosomal protein S5 domain 2-like 406 547 IPR041006 -
Pvu2g1227 672 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 183 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1227 Pvu-Chr2 24010652 24024593 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1227 - - gmx:100782161 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1227 2 24010652 24024593 Pvu2g1227 2 24010652 24024593 ECH