Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1186 ATGATGGACAGTCACGCGGAAGATTCTGCAAGACCTGAGGAGCATTTTCCTGATGCGGATCATCATTACGACGATGGAAGCAATGGGAATATTCTATTGGGAAATGGATTGTCTGATGGCAATCAAGGTCCTGCTGATACTGACGATCAGCTTCTAGAAATGGCTATGGACCTCAGGTTTCAGAATGACTACTTCAAGTCCCAGTTTGAGGGATTTAAAAATGTAAACAGTGTACATAGTGATTCTAGTATACAGAAAGGAGTTGGTGGCTTAGAAGATACGGATTCTGACATTGTGAAAGAACTAAAGGAAAAAATACAATTGTTAAATAAAGAATTTCTGGAAGAAAAGCAAACAAGAATTGCTTCAGAGGAGGCTTTGAAGCATCTTCAATCGTTATACTCAGAGGCAGAAGCAAAGGGCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAACGAAGTTGGACCAAGAAACAAAAGAGCGGGATGAGAAATATTCTGAACTTGACTCCAAGTTTAATAGGCTTCACAAGCGAGCAAAGCAGCGCATTCAAGAAATTCAAAAGGAAAAAGATGATCTTGAGGCCCGTTTCTCTGAGGTGAATGAAATTGCAGCACGAGCATCATCCCAACAGTTGGCAATGCAACAAGAATTAGAGCGTACTAGGAAGCAAGCAAACGAGGCATTGAAAGCCATGGATGGTGATAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAGACGTTCATTGCAACCTAAAGAGAGCGCTCTTGAAGTATTGCAACAGTCACTTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCTGCACTAGTTGAGCTCTCAGCTAAGCATCAAAAGAATATAGAGAGTTTGGAGGCTCAACTTAATGATGCGTTGTCTGACAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACTGGGGAAGCAGTACGACTCAGGGCAGCGGTGGAAAGTGTGAAAGGAGAGCTTTCTCACCTAAAAGAGGAGCATGGAAAAGAAAGGGAAAGCTGGGAAACTGCTTCGCAGGCACTTAAAGCAAAACTTGACATTGCAGAGAGCAACTGCATACGTGCAGAAGTTGAAGTAGCCAAAATAAGAAGTCAGCTGGAGTCAGAGGTATCCGCACAAACGAGGATCCTCAATACGAGAGATGTAGAATTGTTGGCTGCCAAAAAAGAGATCAGCTCTCTAGAGAAGGAATTTTCTTCATACAAAGTTCGTGCACATGCACTTCTTCAAAAGAAAGATGCTGAACTGGCTGCTGCTAAAGATTCTGAACAACTCAAAGCTCTAGAGGAAACTCTGAAAGAGGTTGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAAAGTTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAAGAACTTGCAGAAAGAGACACAACCCTTGAAAATGTCAAGCAACAGATAAGGAGCTTAGAAATAAAGCTTGACTCAGTTAATGCTCAGCACCTAAAAGAGAAAGAGGAATGGGGACTAAGTCTTAAAAATGTAGAAGAAACATGGAGAATCAAATGTGAGGCAATGAAGGTTGAAAATGAAGCAATTGCCACAAAAGATAAACAAAAGGAATTGGAAGAGCTCAAACAGCGATGTAAAAAACTGAAGGAAGAGCATGCTTCATTTCATGATCTTGCTGATAGAATGATAGAGGAGAAAGACTATGAAATATCCAGACTTTTAGATGAAAATAAGAATCTTCGTCAGTCTCTTCAATCAAGACCACAAGTCGATCAAAATGATTATTACACAACAGCCTTGCATAAATTGGATTCAACAAATTTAAGCCCCTCAGCTGCAGAACAGCAAATTCTGCTTTTGGCTAGACAACAAGCGCAGAGAGAGGAAGAGTTAGCACAGTCACAGCGTCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGTGAGAATCGTCTCCACAACCAACAGGAGGCAATGTTAAAGACTGAGTTTCGCAACATGGAAAGATCAAAAAAAAGGGAAGGTGTAGATATGACATATTTGAAGAATGTTATCTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTGCTTCCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATTCAGAAGTGTCAACAGGCATATCACAAATCAACAGAAGTTCCACCAACTCCTGCAAGTGATGCTTCAGGATCTGCCCTATCACTTTTCTCAAGATTCTCATTTTCTTAA 2379 0.4056 MMDSHAEDSARPEEHFPDADHHYDDGSNGNILLGNGLSDGNQGPADTDDQLLEMAMDLRFQNDYFKSQFEGFKNVNSVHSDSSIQKGVGGLEDTDSDIVKELKEKIQLLNKEFLEEKQTRIASEEALKHLQSLYSEAEAKGQELSEKLAEAQTKLDQETKERDEKYSELDSKFNRLHKRAKQRIQEIQKEKDDLEARFSEVNEIAARASSQQLAMQQELERTRKQANEALKAMDGDRQQLRSANNNLRDTIEDLRRSLQPKESALEVLQQSLAEKEQMLEDMRGLLQAAEEKRQAALVELSAKHQKNIESLEAQLNDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAVRLRAAVESVKGELSHLKEEHGKERESWETASQALKAKLDIAESNCIRAEVEVAKIRSQLESEVSAQTRILNTRDVELLAAKKEISSLEKEFSSYKVRAHALLQKKDAELAAAKDSEQLKALEETLKEVENEVLSITEERDKVLQDLQSAMANHEKELAERDTTLENVKQQIRSLEIKLDSVNAQHLKEKEEWGLSLKNVEETWRIKCEAMKVENEAIATKDKQKELEELKQRCKKLKEEHASFHDLADRMIEEKDYEISRLLDENKNLRQSLQSRPQVDQNDYYTTALHKLDSTNLSPSAAEQQILLLARQQAQREEELAQSQRHILALQEEIEELERENRLHNQQEAMLKTEFRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEIQKCQQAYHKSTEVPPTPASDASGSALSLFSRFSFS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1186 792 Coils Coil 177 204 - -
Pvu2g1186 792 Coils Coil 216 257 - -
Pvu2g1186 792 MobiDBLite consensus disorder prediction 1 25 - -
Pvu2g1186 792 SMART 1grip 719 763 IPR000237 -
Pvu2g1186 792 Coils Coil 667 708 - -
Pvu2g1186 792 Coils Coil 459 546 - -
Pvu2g1186 792 Coils Coil 564 601 - -
Pvu2g1186 792 Coils Coil 354 374 - -
Pvu2g1186 792 Coils Coil 99 119 - -
Pvu2g1186 792 MobiDBLite consensus disorder prediction 1 50 - -
Pvu2g1186 792 ProSiteProfiles GRIP domain profile. 716 763 IPR000237 -
Pvu2g1186 792 Coils Coil 606 626 - -
Pvu2g1186 792 Coils Coil 379 413 - -
Pvu2g1186 792 MobiDBLite consensus disorder prediction 31 45 - -
Pvu2g1186 792 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 39 769 - -
Pvu2g1186 792 Pfam GRIP domain 720 759 IPR000237 -
Pvu2g1186 792 Coils Coil 432 452 - -
Pvu2g1186 792 Coils Coil 265 349 - -
Pvu2g1186 792 Coils Coil 127 168 - -
Pvu2g1186 792 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 39 769 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1186 - - gmx:100775990 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1186 2 23328091 23338955 Pvu2g1186 2 23328091 23338955 ECH