Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1178 ATGTCTGTCTCACACATAGCCAAGGAATTTCACTACCATGTTAGATCCATTAGCTTGCCTTGTAGAATACATTCTTCATTACCCAAAATCGAAATAGTGTTGAAGAGGATGAAGACTTGGGAAGCCTCATCACAATCACAGAGTGAGGCTATCAAAGAAGGTCTAAAAGGGCTTGCAGAGTTGTATAATTGTGTAGAGGAACTTGTTGGTTGTCCACTCACTCAGCAAGCTCTTCTACGCCATGAAGGAAAGCATGTAGAGAAGCCACTTGACATGTCAGTTTATTTGCTTGACACGTGTGGATCAGCAAGAGAATTGTTGACACAGATGAAGGAACATGTGCTAGACCTTCAATCAGCCTTGCGGAGAAAGGGTGTGGATTCAAGTGTCAATAGCCAAATTTGTGGTTACATTTGTTTTAGAAAGAATGCAAGAAAAGACATCACAAAAAGACTCAAAGCATTAAAGAAAATGGAGAATGGTTTTAAATTGTATACATACCCTCTCTTGGACTTAGACCACCATCTACTAATGGTGATCAATGTGCTAAGAGAAATAAGCAAAATCACCATCTCATTTTTCAAGAAACTCTTACTTTTCATGTGTGCACCAGTGTTGAAGAAAAACATTGGTGGGTGGTCAATGTTGAGCAGAATGGTGTCCACCAGTGTTGATAAGGAAAATAAGGTCATAAATGAGATGGGGGACATTGATGTTGCTCTCTGCAACTTCCATAAGCGTTGTAAGAAAATTGATGCTAAAACAGAAGTACAAATTGTAAAGAGAGGATTAGGGGAAGTAGAGGGGAGCATTAGAGAATTGGAGGCAGGACTAGATTGTCTCTTTAGGTGCATGATACAACAAAGGGTGTCACTTCTTAATCTTCTCACTTCATAA 897 0.3946 MSVSHIAKEFHYHVRSISLPCRIHSSLPKIEIVLKRMKTWEASSQSQSEAIKEGLKGLAELYNCVEELVGCPLTQQALLRHEGKHVEKPLDMSVYLLDTCGSARELLTQMKEHVLDLQSALRRKGVDSSVNSQICGYICFRKNARKDITKRLKALKKMENGFKLYTYPLLDLDHHLLMVINVLREISKITISFFKKLLLFMCAPVLKKNIGGWSMLSRMVSTSVDKENKVINEMGDIDVALCNFHKRCKKIDAKTEVQIVKRGLGEVEGSIRELEAGLDCLFRCMIQQRVSLLNLLTS* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1178 298 PANTHER SELECTION/UPKEEP OF INTRAEPITHELIAL T-CELLS PROTEIN 5 297 - -
Pvu2g1178 298 Pfam Protein BPS1 54 294 IPR004320 GO:0048364|GO:0048367
Pvu2g1178 298 PANTHER OS06G0725500 PROTEIN 5 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1178 Pvu-Chr2 23172130 23173026 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1178 - - vun:114174609 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1178 2 23172130 23173026 Pvu3g2762 3 49467301 49468766 PCT