Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1160 ATGACTAGTTCCTCTGGTGCCGCTCGCAAGAATCTCAGTAAGATTGCCTGCAATAGGCTCCAGAAAGAGCTCGTCGAGTGGCAGGTGAATCCCCCAACTGGTTTCAAACACAAAGTTACCGATAATCTCCAGAGGTGGGTTGTTGAAGTCATTGGAGCTCCTGGGACGCTTTACGCCAATGAGACCTACCAGCTTCAAGTCGATTTTCCCGAGAATTACCCTATGGAAGCTCCCCAGGTCATATTCTTGCATCCGGCTCCTCTGCATCCCCATATCTACAGCAACGGTCATATTTGTCTAGATATATTGTATGATTCCTGGTCCCCTGCCATGACAGTTAGTTCTATCTGCATCAGTATTCTCTCAATGCTTTCAAGCTCGACCACAAAGCAACGCCCTGAAGATAATGATCGCTATGTAAAGAACTGCAGAAACGGCAGATCGCCTAAGGAGACGAGGTGGTGGTTCCATGATGACAAAGTATAA 486 0.4733 MTSSSGAARKNLSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVVEVIGAPGTLYANETYQLQVDFPENYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTTKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1160 161 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 11 161 - -
Pvu2g1160 161 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 15 161 IPR000608 -
Pvu2g1160 161 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED 11 161 - -
Pvu2g1160 161 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 88 103 IPR023313 -
Pvu2g1160 161 SUPERFAMILY UBC-like 5 126 IPR016135 -
Pvu2g1160 161 Pfam Ubiquitin-conjugating enzyme 19 154 IPR000608 -
Pvu2g1160 161 CDD UBCc 17 117 IPR000608 -
Pvu2g1160 161 SMART ubc_7 18 161 - -
Pvu2g1160 161 Gene3D Ubiquitin Conjugating Enzyme 15 161 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1160 Pvu-Chr2 22900543 22904324 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1160 1 112 Miscellaneous Gene Families AT2G33770 27.826 1.34e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1160 K10688 - gmx:100785024 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1160 2 22900543 22904324 Pvu2g1160 2 22900543 22904324 ECH