Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1154 TCTGAAGTGGATTTTGATGACAAGAGCAGCTGGGAGTATCTTTTCAAGGTTTATTGGACATATTTGAAGGAGAAGCTATCTTTGACCATTGATGAGATCCTTGAAGCTAAAAATCCATGCAAAGGGGTTGCGAGATTAGAAGTATCAGGTGTTGCAGCAGGTGTTTCATCACTATTTCTCTCTCCAAAGACGGAGCTGCCAATTGGCAATATTGCGAATGATAAATTATGGCATTATCAGGATCCAACCGGGAAGGTTCAAGGACCTTTCTCTTTATTGCAGCTTTATACGTGGAATGTGAGTGGATATTTTCCGGTAGATCTCAGAATATGGAGGATAGATGAGACACAAGATAATGCTGCATTGTTAATTGATGTGCTGAGTGGGAAGTGCTCAAAACTTGTGTCATTGACATACGACAGCCAGAAGCTGTCTTTGGAGACCAATAGTACATTGGAAAATAAAGAAAGTAGTCAGGATGGTGGTGGTGAGCACAATGTGACAACAAACGGAAATTCTGCTAATCACCAAATTGTTGAGCAGTGTGGGGAGCAAAAATTGGTTGATACCTGTACACAATCTAATGGTAAAGATGAATCTGTTAAGAGCAATGGTTGGCACTCTCAGTCTCCGGGTTGGACTATACAAGCAGATGGGAATAATAATGAGGGGCAAAGTGGAAATTCTGAAAGGAGGGAGGAGTCACCCAAATGTGAGGACCGTCCTCATTTACATCCTTCACTACCTTCAACTGCATTTTGTGAAAAACTCGAAGAGAATCCCTCTGATAAATTAGAGGAAGTTCATAAGATAGAGGTGAAGTCTGAAGATAATGGAAATTTTGACTTGAACAGAATTTTTGATGGTCAAAGTAATAGTGGACAAACTTATCAGAAACAATCAGACAGTGAGGATAATTCAGGGCAGTCTTCTGGTCAGAACTGGAGTTGCCCTAGTGTAACTAATCCAGTTTGTAACCTATCTACATGGCTTTCAATCTTTGGCGAACCAAATGATTTGGATGAGTCAGTTTCAGATCTGTTGGCTGAAGTGGAGGCAATGGAGTCGCGTGGTGGTGGCCTGGAATCTCCCACTTCGATCATGAAATGTGGTGAGGAGTTGACTGACGGTTCTATAACTGATTGTCTTAGTTTTGCAGATGGGCTTAGCCCAATGCTTGATGCAGCAGGTAAAGGTGACGCACTGAGCTCCTCAGGTGATTTACACTTTCCATTAAAAACCACAACACCAGATGAACCAACTAAGCAAGCCGATGTGGACCATCAATATCAAAAGATATCTGGGAAGCATACATCAAAGAGTTCAGAAGTTGAGTCTACTTTCTCTAAGATTAGCTGGAATCCAACCATTCAATTTTCCTGGGATCCTCCTAATTGTTGA 1401 0.4154 SEVDFDDKSSWEYLFKVYWTYLKEKLSLTIDEILEAKNPCKGVARLEVSGVAAGVSSLFLSPKTELPIGNIANDKLWHYQDPTGKVQGPFSLLQLYTWNVSGYFPVDLRIWRIDETQDNAALLIDVLSGKCSKLVSLTYDSQKLSLETNSTLENKESSQDGGGEHNVTTNGNSANHQIVEQCGEQKLVDTCTQSNGKDESVKSNGWHSQSPGWTIQADGNNNEGQSGNSERREESPKCEDRPHLHPSLPSTAFCEKLEENPSDKLEEVHKIEVKSEDNGNFDLNRIFDGQSNSGQTYQKQSDSEDNSGQSSGQNWSCPSVTNPVCNLSTWLSIFGEPNDLDESVSDLLAEVEAMESRGGGLESPTSIMKCGEELTDGSITDCLSFADGLSPMLDAAGKGDALSSSGDLHFPLKTTTPDEPTKQADVDHQYQKISGKHTSKSSEVESTFSKISWNPTIQFSWDPPNC* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1154 466 MobiDBLite consensus disorder prediction 227 244 - -
Pvu2g1154 466 MobiDBLite consensus disorder prediction 279 316 - -
Pvu2g1154 466 MobiDBLite consensus disorder prediction 190 226 - -
Pvu2g1154 466 SMART gyf_5 75 130 IPR003169 GO:0005515
Pvu2g1154 466 MobiDBLite consensus disorder prediction 149 171 - -
Pvu2g1154 466 Pfam GYF domain 77 117 IPR003169 GO:0005515
Pvu2g1154 466 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 321 447 - -
Pvu2g1154 466 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 67 332 - -
Pvu2g1154 466 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44-RELATED 2 46 - -
Pvu2g1154 466 MobiDBLite consensus disorder prediction 284 316 - -
Pvu2g1154 466 ProSiteProfiles GYF domain profile. 74 128 IPR003169 GO:0005515
Pvu2g1154 466 Gene3D - 76 132 IPR035445 -
Pvu2g1154 466 MobiDBLite consensus disorder prediction 190 252 - -
Pvu2g1154 466 SUPERFAMILY GYF domain 73 127 IPR035445 -
Pvu2g1154 466 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 321 447 - -
Pvu2g1154 466 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 2 46 - -
Pvu2g1154 466 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 44 67 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1154 Pvu-Chr2 22749472 22751948 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1154 - - pvu:PHAVU_002G1117000 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1154 2 22749472 22751948 Pvu2g1154 2 22749472 22751948 ECH